RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SLC7A6OSQ96CW6 309 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 TMEM41AQ96HV5 264 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 C1orf43Q9BWL3 253 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 CARD11Q9BXL7 1154 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 KATNBL1Q9H079 304 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 L2HGDHQ9H9P8 463 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 CASS4Q9NQ75 786 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 MOCS1Q9NZB8 636 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 AFF4Q9UHB7 1163 aaKnown RBP6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 PCDHGB2Q9Y5G2 931 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 PMF1-BGLAPU3KQ54 211 aa6.41□□□□□ -1.38
HMGB1P3-201ENST00000502802 ADAMTS3O15072 1205 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 TEX33O43247 280 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 TOX4O94842 621 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 AHSGP02765 367 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 GRK6P43250 576 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 SARSP49591 514 aaKnown RBP6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 SOX8P57073 446 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 ICA1Q05084 483 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 BIRC3Q13489 604 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 ATP2B3Q16720 1220 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZNF827Q17R98 1081 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 PRAMEF14Q5SWL7 426 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 EMC10Q5UCC4 262 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 Q6ZUG5 572 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 SYTL1Q8IYJ3 562 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZDHHC14Q8IZN3 488 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 DCBLD1Q8N8Z6 715 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 NMD3Q96D46 503 aaKnown RBP6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 CDC5LQ99459 802 aaKnown RBP6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 P2RX7Q99572 595 aaKnown RBP6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 BRIP1Q9BX63 1249 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 TRIM54Q9BYV2 358 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 GCM1Q9NP62 436 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 SACM1LQ9NTJ5 587 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 STK32BQ9NY57 414 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 FAM53CQ9NYF3 392 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 COL20A1Q9P218 1284 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 DGKBQ9Y6T7 804 aa6.4□□□□□ -1.38
HMGB1P3-201ENST00000502802 ABCC9O60706 1549 aa6.4□□□□□ -1.39
HMGB1P3-201ENST00000502802 NRP1O14786 923 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 ADAM23O75077 832 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 JUNP05412 331 aaKnown RBP6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 CD1AP06126 327 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 VSIG10L2P0DP72 767 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 HDCP19113 662 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 RPL13P26373 211 aaKnown RBP6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 CCT5P48643 541 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 PIK3CGP48736 1102 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 FLT3LGP49771 235 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 RENBPP51606 427 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 ARFIP2P53365 341 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 PMS2P11Q13670 270 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 ELF2Q15723 593 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 ARL13BQ3SXY8 428 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 PGBD2Q6P3X8 592 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 TLDC1Q6P9B6 456 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 PLXDC1Q8IUK5 500 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 PAF1Q8N7H5 531 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 ATP11CQ8NB49 1132 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 OR10H5Q8NGA6 315 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 OR6B3Q8NGW1 331 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 TNPO1Q92973 898 aaKnown RBP6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 AJUBAQ96IF1 538 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 C11orf54Q9H0W9 315 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 OR10A2Q9H208 303 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 KCNK12Q9HB15 430 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZDHHC8Q9ULC8 765 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 GTF2A1LQ9UNN4 478 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 CEP83Q9Y592 693 aa6.39□□□□□ -1.39
HMGB1P3-201ENST00000502802 A0A1W2PPC4 97 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 WNT10BO00744 389 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 TLR5O60602 858 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 THP07101 528 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 HARSP12081 509 aaKnown RBP6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 KCNJ5P48544 419 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 HSPA7P48741 367 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 RRADP55042 308 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 BPIFB4P59827 614 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 CREMQ03060 361 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 BLMHQ13867 455 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 STARD3Q14849 445 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 PABPC1LQ4VXU2 614 aaKnown RBP6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 CCDC38Q502W7 563 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 C3orf38Q5JPI3 329 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 KLHDC7AQ5VTJ3 777 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 AGBL4Q5VU57 503 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 KRT40Q6A162 431 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 LDHAL6AQ6ZMR3 332 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 USP30Q70CQ3 517 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 TMEFF1Q8IYR6 380 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 MYCT1Q8N699 235 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms