RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 TSSK4Q6SA08 328 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 CD300LGQ6UXG3 332 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 TPRG1Q6ZUI0 275 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 CATSPER3Q86XQ3 398 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 MCPH1Q8NEM0 835 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 ATRIPQ8WXE1 791 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 CLDN23Q96B33 292 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 TMEM60Q9H2L4 133 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 POLD4Q9HCU8 107 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 MTRRQ9UBK8 725 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 KCNH3Q9ULD8 1083 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 MRPS23Q9Y3D9 190 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 PCDHGA2Q9Y5H1 932 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 CDY1Q9Y6F8 540 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 SHISA7A6NL88 538 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 I3L4J1 428 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 ACKR2O00590 384 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 MED24O75448 989 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 CLCNKBP51801 687 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 FOSBP53539 338 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 FZD5Q13467 585 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 MAPK6Q16659 721 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 GLRA4Q5JXX5 417 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 TANGO2Q6ICL3 276 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 NECAB1Q8N987 351 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 ZBTB44Q8NCP5 570 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 WASF1Q92558 559 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 CCDC113Q9H0I3 377 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 C2orf40Q9H1Z8 148 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 GOLGA2P5Q9HBQ8 144 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 HEBP1Q9NRV9 189 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 ZSCAN32Q9NX65 697 aa16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 KIF26AQ9ULI4 1882 aaPredicted RBP16.16■□□□□ 0.18
SEC61A1-207ENST00000498837 TMEM189-UBE2V1I3L0A0 370 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 LILRB5O75023 590 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 ECI2O75521 394 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 B3GAT3O94766 335 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 RHOP08100 348 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 ANK1P16157 1881 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 MAGEA9P43362 315 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 BRCC3P46736 316 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 C3orf58Q8NDZ4 430 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 NELL1Q92832 810 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 BORCS6Q96GS4 357 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 PPP1R10Q96QC0 940 aaKnown RBP16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 TUFT1Q9NNX1 390 aa16.15■□□□□ 0.18
SEC61A1-207ENST00000498837 MAP1BP46821 2468 aaKnown RBP16.14■□□□□ 0.18
SEC61A1-207ENST00000498837 SDK1Q7Z5N4 2213 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 NRG2O14511 850 aaPredicted RBP16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 LARGE1O95461 756 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 CEBPBP17676 345 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 RPS9P46781 194 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 RBM25P49756 843 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 UPP1Q16831 310 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 NT5DC1Q5TFE4 455 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 PADI6Q6TGC4 694 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 RTL10Q7L3V2 364 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 DIS3L2Q8IYB7 885 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 CNTNAP3BQ96NU0 1288 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 NACC1Q96RE7 527 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 NELL2Q99435 816 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 KIFC3Q9BVG8 833 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 CNTNAP3Q9BZ76 1288 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 EPC1Q9H2F5 836 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 GDE1Q9NZC3 331 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 SMG5Q9UPR3 1016 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 BACE2Q9Y5Z0 518 aa16.14■□□□□ 0.17
SEC61A1-207ENST00000498837 SPAG17Q6Q759 2223 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 NCAM2O15394 837 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 PTPN2P17706 415 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 CYP11B2P19099 503 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 NAMPTP43490 491 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 ATXN1P54253 815 aaKnown RBP16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 SOX4Q06945 474 aaPredicted RBP16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 MTAPQ13126 283 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 ZNF852Q6ZMS4 543 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 DEPTORQ8TB45 409 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 TCEAL4Q96EI5 215 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 PRMT8Q9NR22 394 aaPredicted RBP16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 ATG2BQ96BY7 2078 aa16.13■□□□□ 0.17
SEC61A1-207ENST00000498837 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 TGM1P22735 817 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 FCARP24071 287 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 MCM7P33993 719 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 ROR1Q01973 937 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 ADCY1Q08828 1119 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 GRM2Q14416 872 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 ME3Q16798 604 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 DCAF4L1Q3SXM0 396 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 PRSS36Q5K4E3 855 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 GPR161Q8N6U8 529 aaKnown RBP16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 CEP120Q8N960 986 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 ZNF461Q8TAF7 563 aa16.12■□□□□ 0.17
SEC61A1-207ENST00000498837 ELSPBP1Q96BH3 223 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms