RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 GPC5P78333 572 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 IRX6P78412 446 aaPredicted RBP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 KRT17Q04695 432 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 PPFIA1Q13136 1202 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 NONOQ15233 471 aaKnown RBP eCLIP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 SF3A2Q15428 464 aaKnown RBP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 MARCH8Q5T0T0 291 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 TAF2Q6P1X5 1199 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 NFXL1Q6ZNB6 911 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 CATIPQ7Z7H3 387 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 PDZD3Q86UT5 571 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 CTCFLQ8NI51 663 aaPredicted RBP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 TRAPPC12Q8WVT3 735 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 GLG1Q92896 1179 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 RRP36Q96EU6 259 aaKnown RBP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 PGBD1Q96JS3 809 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 INPP4AQ96PE3 977 aaPredicted RBP6.3□□□□□ -1.4
SPTA1-209ENST00000498708 LRRC2Q9BYS8 371 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 SLC2A4RGQ9NR83 387 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 KLK14Q9P0G3 267 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 EPS15L1Q9UBC2 864 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 NAGPAQ9UK23 515 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 DOCK6Q96HP0 2047 aa6.3□□□□□ -1.4
SPTA1-209ENST00000498708 NBPF19A0A087WUL8 3843 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SCO2A0A1W2PP80 73 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 C9IYK1 514 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 MEIS2O14770 477 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 MICAL2O94851 1124 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 TARSP26639 723 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 NT5C2P49902 561 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 LIMK1P53667 647 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 TROAPQ12815 778 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 TRAF1Q13077 416 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 PAK2Q13177 524 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SRSF5Q13243 272 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 FZD5Q13467 585 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SART3Q15020 963 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 C11orf91Q3C1V1 193 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 TTC22Q5TAA0 569 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 STPG1Q5TH74 334 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 TRMT1LQ7Z2T5 733 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 RSPH3Q86UC2 560 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 ZNF654Q8IZM8 581 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SLC39A11Q8N1S5 342 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SAMD3Q8N6K7 520 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 CELF5Q8N6W0 485 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 FAM200AQ8TCP9 573 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 RUFY2Q8WXA3 655 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SEPT1Q8WYJ6 367 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 MYO19Q96H55 970 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SHDQ96IW2 340 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 ZNF558Q96NG5 402 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 CASD1Q96PB1 797 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 PPP1R16BQ96T49 567 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 ADAM2Q99965 735 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 LSM14BQ9BX40 385 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SFXN1Q9H9B4 322 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 PRMT8Q9NR22 394 aaPredicted RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 RGS18Q9NS28 235 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 RNF19AQ9NV58 838 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SPG21Q9NZD8 308 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 SEC63Q9UGP8 760 aaKnown RBP6.29□□□□□ -1.4
SPTA1-209ENST00000498708 TUBE1Q9UJT0 475 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 HECTD1Q9ULT8 2610 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 GINS2Q9Y248 185 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 NUMBLQ9Y6R0 609 aa6.29□□□□□ -1.4
SPTA1-209ENST00000498708 IGSF9BQ9UPX0 1349 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 MYO18BQ8IUG5 2567 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 USP9XQ93008 2570 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 MBLAC1A4D2B0 266 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 CCDC69A6NI79 296 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ANHXE9PGG2 379 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 DDX39AO00148 427 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 PRC1O43663 620 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 STAM2O75886 525 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 MYBP10242 640 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 LAMP2P13473 410 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 INSRRP14616 1297 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 CPB1P15086 417 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 KCNA2P16389 499 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ITGB5P18084 799 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 CHMLP26374 656 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 METAP2P50579 478 aaKnown RBP eCLIP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 MTAPQ13126 283 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 HTR4Q13639 388 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 SIM2Q14190 667 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 MLF2Q15773 248 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 COL28A1Q2UY09 1125 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 AASDHQ4L235 1098 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 SLC44A4Q53GD3 710 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 PCNX4Q63HM2 1172 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 CASC1Q6TDU7 716 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms