RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	MBTPS2	O43462	519 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	XPOT	O43592	962 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	B3GAT3	O94766	335 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	GCNT3	O95395	438 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	GLP2R	O95838	553 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	EFEMP2	O95967	443 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	ADH1A	P07327	375 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	HARS	P12081	509 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	KLRC2	P26717	231 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	NMT1	P30419	496 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	RPL9	P32969	192 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	POU5F1	Q01860	360 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	DSG1	Q02413	1049 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	DLX2	Q07687	328 aa	Predicted RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	KCNC3	Q14003	757 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	NAB2	Q15742	525 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	SMAD2	Q15796	467 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	ANKRD54	Q6NXT1	300 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	CEP57L1	Q8IYX8	460 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	CEP120	Q8N960	986 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	LEO1	Q8WVC0	666 aa	Predicted RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	ZBTB45	Q96K62	511 aa	Predicted RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	ACCS	Q96QU6	501 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	MSTO1	Q9BUK6	570 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	VN1R3	Q9BXE9	311 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	TMEM206	Q9H813	350 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	RPF1	Q9H9Y2	349 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	CHST7	Q9NS84	486 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	USP25	Q9UHP3	1055 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	KCNH3	Q9ULD8	1083 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	ZDHHC9	Q9Y397	364 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	TCF20	Q9UGU0	1960 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	NCOR1	O75376	2440 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	LILRB3	O75022	631 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	PPP1R37	O75864	691 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	CMA1	P23946	247 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	ITIH3	Q06033	890 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	PPP2R3A	Q06190	1150 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	UPP1	Q16831	310 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	SLC10A6	Q3KNW5	377 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	GLRA4	Q5JXX5	417 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	L1TD1	Q5T7N2	865 aa	Known RBP	11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	KIAA0319	Q5VV43	1072 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	CES5A	Q6NT32	575 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	LLGL2	Q6P1M3	1020 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	SYCP3	Q8IZU3	236 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	RNF25	Q96BH1	459 aa	Predicted RBP	11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	CCDC34	Q96HJ3	373 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	NECTIN4	Q96NY8	510 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	KLHL5	Q96PQ7	755 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	C7orf25	Q9BPX7	421 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	TRIM9	Q9C026	710 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	RXFP1	Q9HBX9	757 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	FNIP2	Q9P278	1114 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	STYXL1	Q9Y6J8	313 aa		11.46	□□□□□ -0.57
FXR1-222	ENST00000498658	TTC28	Q96AY4	2481 aa		11.46	□□□□□ -0.58
FXR1-222	ENST00000498658	MUC3A	Q02505	3323 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	C2CD2L	O14523	706 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	KIF4A	O95239	1232 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	LDHA	P00338	332 aa	Known RBP	11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	MYL1	P05976	194 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	CNP	P09543	421 aa	Known RBP	11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	IL9	P15248	144 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	CYP3A5	P20815	502 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	PAX3	P23760	479 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	CLCNKB	P51801	687 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	ASIC1	P78348	528 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	CLUL1	Q15846	466 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	FAM171A1	Q5VUB5	890 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	ADHFE1	Q8IWW8	467 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	VN1R2	Q8NFZ6	395 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	SLC22A17	Q8WUG5	538 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	HDAC7	Q8WUI4	952 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	AUTS2	Q8WXX7	1259 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	POMGNT1	Q8WZA1	660 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	PAAF1	Q9BRP4	392 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	TTPAL	Q9BTX7	342 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	STRA6	Q9BX79	667 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	GPR62	Q9BZJ7	368 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	UBQLN1	Q9UMX0	589 aa	Known RBP	11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	TRIP11	Q15643	1979 aa		11.45	□□□□□ -0.58
FXR1-222	ENST00000498658	PVALEF	A0A1B0GWK0	134 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	TTC26	A0AVF1	554 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	PODXL	O00592	558 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	KIAA0391	O15091	583 aa	Known RBP	11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	EIF3D	O15371	548 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	TEX28	O15482	410 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	GLUD1	P00367	558 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	ADRB2	P07550	413 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	SLFN14	P0C7P3	912 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	CXCL8	P10145	99 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	CLCN4	P51793	760 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	CYP26C1	Q6V0L0	522 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	TAS1R1	Q7RTX1	841 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	CEP57	Q86XR8	500 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	GJD3	Q8N144	294 aa		11.44	□□□□□ -0.58
FXR1-222	ENST00000498658	HASPIN	Q8TF76	798 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms