RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 WASF1Q92558 559 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 MCRS1Q96EZ8 462 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 KIFC3Q9BVG8 833 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 OSBPL6Q9BZF3 934 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 POLD4Q9HCU8 107 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 SHISA7A6NL88 538 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 ACKR2O00590 384 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 CLCNKBP51801 687 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 PFKPQ01813 784 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 MAPK6Q16659 721 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 VARS2Q5ST30 1063 aaKnown RBP17.71■□□□□ 0.43
MUC1-220ENST00000498431 PDXDC1Q6P996 788 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 TSSK4Q6SA08 328 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 TPRG1Q6ZUI0 275 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
MUC1-220ENST00000498431 PPP1R10Q96QC0 940 aaKnown RBP17.71■□□□□ 0.43
MUC1-220ENST00000498431 ADPGKQ9BRR6 497 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 C2orf40Q9H1Z8 148 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 TUFT1Q9NNX1 390 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 KCNH3Q9ULD8 1083 aa17.71■□□□□ 0.43
MUC1-220ENST00000498431 MRPS23Q9Y3D9 190 aaKnown RBP17.71■□□□□ 0.43
MUC1-220ENST00000498431 TMEM189-UBE2V1I3L0A0 370 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 NRG2O14511 850 aaPredicted RBP17.7■□□□□ 0.42
MUC1-220ENST00000498431 SPTLC1O15269 473 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 JAK2O60674 1132 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 B3GAT3O94766 335 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 RHOP08100 348 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 CEBPBP17676 345 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 MCM7P33993 719 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 BRCC3P46736 316 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 FZD5Q13467 585 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 ME3Q16798 604 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 ZBTB41Q5SVQ8 909 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 NT5DC1Q5TFE4 455 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 PADI6Q6TGC4 694 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 ZBTB44Q8NCP5 570 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 NSUN7Q8NE18 718 aaKnown RBP17.7■□□□□ 0.42
MUC1-220ENST00000498431 CLDN23Q96B33 292 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 HEBP1Q9NRV9 189 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 NCDNQ9UBB6 729 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 PCDHGA2Q9Y5H1 932 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 SPTBN2O15020 2390 aa17.7■□□□□ 0.42
MUC1-220ENST00000498431 EPG5Q9HCE0 2579 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 ECI2O75521 394 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 CYP11B2P19099 503 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 NAMPTP43490 491 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 RBM25P49756 843 aaKnown RBP17.69■□□□□ 0.42
MUC1-220ENST00000498431 SOX4Q06945 474 aaPredicted RBP17.69■□□□□ 0.42
MUC1-220ENST00000498431 UPP1Q16831 310 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 TANGO2Q6ICL3 276 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 DEPTORQ8TB45 409 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 NELL1Q92832 810 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 GTF3C6Q969F1 213 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 NACC1Q96RE7 527 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 POLR3CQ9BUI4 534 aaPredicted RBP17.69■□□□□ 0.42
MUC1-220ENST00000498431 BACE2Q9Y5Z0 518 aa17.69■□□□□ 0.42
MUC1-220ENST00000498431 FCARP24071 287 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 DCAF4L1Q3SXM0 396 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 CEP120Q8N960 986 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 ATRIPQ8WXE1 791 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 TCEAL4Q96EI5 215 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 ZSCAN32Q9NX65 697 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 GDE1Q9NZC3 331 aa17.68■□□□□ 0.42
MUC1-220ENST00000498431 SMG5Q9UPR3 1016 aaKnown RBP17.68■□□□□ 0.42
MUC1-220ENST00000498431 COL4A2P08572 1712 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 ARHGEF35A5YM69 484 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 LILRB5O75023 590 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 MAGEA9P43362 315 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 ROR1Q01973 937 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 GRM2Q14416 872 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 ECM1Q16610 540 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 RTL10Q7L3V2 364 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 EPC1Q9H2F5 836 aa17.67■□□□□ 0.42
MUC1-220ENST00000498431 PRMT8Q9NR22 394 aaPredicted RBP17.67■□□□□ 0.42
MUC1-220ENST00000498431 KMT2BQ9UMN6 2715 aaPredicted RBP17.66■□□□□ 0.42
MUC1-220ENST00000498431 SMIM28A0A1B0GU29 152 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 WDR27A2RRH5 827 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 RPA1P27694 616 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 CCR2P41597 374 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 RPS9P46781 194 aaKnown RBP17.66■□□□□ 0.42
MUC1-220ENST00000498431 MTAPQ13126 283 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 PRSS36Q5K4E3 855 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 ZNF852Q6ZMS4 543 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 ZNF687Q8N1G0 1237 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 CORO1BQ9BR76 489 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 AVENQ9NQS1 362 aaPredicted RBP17.66■□□□□ 0.42
MUC1-220ENST00000498431 GTF3C3Q9Y5Q9 886 aa17.66■□□□□ 0.42
MUC1-220ENST00000498431 CACNA1BQ00975 2339 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 ABLIM3O94929 683 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 SEC24AO95486 1093 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 LRG1P02750 347 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 PTPN2P17706 415 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 TGM1P22735 817 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 ATXN1P54253 815 aaKnown RBP17.65■□□□□ 0.42
MUC1-220ENST00000498431 ARPP19P56211 112 aa17.65■□□□□ 0.42
MUC1-220ENST00000498431 OSTNP61366 133 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms