RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 WDR46O15213 610 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 ZNF202O95125 648 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 CAVIN2O95810 425 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 SYKP43405 635 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 PLCB3Q01970 1234 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 TFF2Q03403 129 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 SNW1Q13573 536 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 ZRSR1Q15695 479 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 CDC37Q16543 378 aaPredicted RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 VMACQ2NL98 169 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 QRICH1Q2TAL8 776 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 SPATS1Q496A3 300 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 RESP18Q5W5W9 173 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 ARL6IP4Q66PJ3 421 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 SLC6A19Q695T7 634 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 RASGRP2Q7LDG7 609 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 SCYL3Q8IZE3 742 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 RETREG2Q8NC44 543 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 ENGASEQ8NFI3 743 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 DNAJB8Q8NHS0 232 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 ACER1Q8TDN7 264 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 LPAR1Q92633 364 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 FEZ1Q99689 392 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 OSBPL7Q9BZF2 842 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 KIAA1683Q9H0B3 1180 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 PSTPIP2Q9H939 334 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 FBXO2Q9UK22 296 aaPredicted RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 PNMA2Q9UL42 364 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 OGDHLQ9ULD0 1010 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 CTDP1Q9Y5B0 961 aaPredicted RBP5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 PCDHA1Q9Y5I3 950 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 OTOFQ9HC10 1997 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 C19orf81C9J6K1 198 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 HRKO00198 91 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 FOSP01100 380 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 PGRP06401 933 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 CYP2C8P10632 490 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 PFKFB1P16118 471 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 MCM7P33993 719 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 LONP1P36776 959 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 PRPHP41219 470 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 NDUFA8P51970 172 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 EPHB3P54753 998 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 ATP2C1P98194 919 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 MOGSQ13724 837 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 ZYXQ15942 572 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 CAMK4Q16566 473 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 INF2Q27J81 1249 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 SHROOM1Q2M3G4 852 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 LETM2Q2VYF4 491 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 EARS2Q5JPH6 523 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 FAM83BQ5T0W9 1011 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 JAKMIP3Q5VZ66 844 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 SHC4Q6S5L8 630 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 RBM43Q6ZSC3 357 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 NEK8Q86SG6 692 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 GAS2L3Q86XJ1 694 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 ELOA2Q8IYF1 753 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 SPICE1Q8N0Z3 855 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 PRPF38AQ8NAV1 312 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 DTWD2Q8NBA8 298 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 RASGRP4Q8TDF6 673 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 TBCKQ8TEA7 893 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 CLIC6Q96NY7 704 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 WRNIP1Q96S55 665 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 NUP88Q99567 741 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 GOLPH3LQ9H4A5 285 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 EBF1Q9UH73 591 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 USP25Q9UHP3 1055 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 HPSEQ9Y251 543 aa5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 MRPL11Q9Y3B7 192 aaKnown RBP5.95□□□□□ -1.46
HMGXB4-208ENST00000498325 GFRA2O00451 464 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 MARCH6O60337 910 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 CCNT1O60563 726 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ZBED4O75132 1171 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 XRCC6P12956 609 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 GCFC2P16383 781 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 EFEMP1Q12805 493 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 SNAPC2Q13487 334 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 NOL9Q5SY16 702 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ANKRD23Q86SG2 305 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 CKAP2LQ8IYA6 745 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 CEP57L1Q8IYX8 460 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 SAMD3Q8N6K7 520 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 SYT8Q8NBV8 401 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 CNNM3Q8NE01 707 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 AK8Q96MA6 479 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 SLF1Q9BQI6 1058 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 RAB34Q9BZG1 259 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 NAT10Q9H0A0 1025 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 CSRNP2Q9H175 543 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 RANBP17Q9H2T7 1088 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ADAM7Q9H2U9 754 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 PRDM12Q9H4Q4 367 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 EHMT1Q9H9B1 1298 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ANO10Q9NW15 660 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 TMOD4Q9NZQ9 345 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ATAD5Q96QE3 1844 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms