RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 TFAMQ00059 246 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 TMEM132DQ14C87 1099 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 HSP90AA4PQ58FG1 418 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 JADE1Q6IE81 842 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 FOXR2Q6PJQ5 311 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 INTS8Q75QN2 995 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 MAFAQ8NHW3 353 aaPredicted RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 ENOX1Q8TC92 643 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 TIFAQ96CG3 184 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 FBXL18Q96ME1 805 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 RAD9AQ99638 391 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 ASB7Q9H672 318 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 MMRN2Q9H8L6 949 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 SLC38A7Q9NVC3 462 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 ARMCX3Q9UH62 379 aaPredicted RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 R3HCC1Q9Y3T6 440 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 NFE2L3Q9Y4A8 694 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 SMIM28A0A1B0GU29 152 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 GOLGA6L19H0YKK7 550 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 MAPK13O15264 365 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 CAVIN2O95810 425 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 TNNC2P02585 160 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.42
CTTN-208ENST00000498223 VAMP7P51809 220 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 ZNF445P59923 1031 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 POU5F1Q01860 360 aaKnown RBP12.4□□□□□ -0.42
CTTN-208ENST00000498223 PSMD6Q15008 389 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 DCAF17Q5H9S7 520 aaPredicted RBP12.4□□□□□ -0.42
CTTN-208ENST00000498223 LMBRD2Q68DH5 695 aaPredicted RBP12.4□□□□□ -0.42
CTTN-208ENST00000498223 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 CMTR2Q8IYT2 770 aaKnown RBP12.4□□□□□ -0.42
CTTN-208ENST00000498223 LRRC43Q8N309 656 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 ANKRD20A12PQ8NF67 263 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 BEST2Q8NFU1 509 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 TMEM174Q8WUU8 243 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 ANKRD36BP1Q96IX9 119 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 MFSD14AQ96MC6 490 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 MED15Q96RN5 788 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 CXCL16Q9H2A7 254 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 THAP9Q9H5L6 903 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 CBX8Q9HC52 389 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.42
CTTN-208ENST00000498223 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 MIOSQ9NXC5 875 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 CNTN3Q9P232 1028 aa12.4□□□□□ -0.42
CTTN-208ENST00000498223 PES1O00541 588 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 PTGESO14684 152 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTTN-208ENST00000498223 PHACTR2O75167 634 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 TPM2P07951 284 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 NFICP08651 508 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 KRT19P08727 400 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 OR1G1P47890 313 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 BFSP1Q12934 665 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 ALKAL1Q6UXT8 129 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 FRMD5Q7Z6J6 570 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 ZC3H3Q8IXZ2 948 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 TMC2Q8TDI7 906 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 C18orf25Q96B23 403 aaPredicted RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 CNOT6LQ96LI5 555 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 TSPAN18Q96SJ8 248 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 BPIFA3Q9BQP9 254 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 ZNF576Q9H609 170 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 SAMSN1Q9NSI8 373 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 FANCLQ9NW38 375 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 UBQLN1Q9UMX0 589 aaKnown RBP12.39□□□□□ -0.43
CTTN-208ENST00000498223 DERAQ9Y315 318 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 PCDHA11Q9Y5I1 949 aa12.39□□□□□ -0.43
CTTN-208ENST00000498223 PLXNA4Q9HCM2 1894 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 CASTOR2A6NHX0 329 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 IKBKBO14920 756 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 MEFVO15553 781 aaPredicted RBP12.38□□□□□ -0.43
CTTN-208ENST00000498223 STX10O60499 249 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
CTTN-208ENST00000498223 MYOGP15173 224 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 KCNE1P15382 129 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 PBX2P40425 430 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 ALDH7A1P49419 539 aaKnown RBP12.38□□□□□ -0.43
CTTN-208ENST00000498223 WNT7BP56706 349 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 HTRA4P83105 476 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms