RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 EFCAB13Q8IY85 973 aa19.18■□□□□ 0.66
CHRNA4-206ENST00000498043 U2AF1L4Q8WU68 220 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-206ENST00000498043 CYP26A1O43174 497 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 MYCNP04198 464 aaPredicted RBP19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 MCF2P10911 925 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 TFAMQ00059 246 aaKnown RBP19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 GCNT1Q02742 428 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 NCOA4Q13772 614 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 FAM71AQ8IYT1 594 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 TSC1Q92574 1164 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 GCOM2Q9BZD3 368 aaPredicted RBP19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 RPF1Q9H9Y2 349 aaKnown RBP19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 ACP6Q9NPH0 428 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 NENFQ9UMX5 172 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 THSD7BQ9C0I4 1608 aa19.17■□□□□ 0.66
CHRNA4-206ENST00000498043 ENC1O14682 589 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 BUB1O43683 1085 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 STAG3L1P0CL83 205 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 HTRA3P83110 453 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 ZNF784Q8NCA9 323 aaPredicted RBP19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 MTG1Q9BT17 334 aaPredicted RBP19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 UPF3AQ9H1J1 476 aaKnown RBP19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SPC25Q9HBM1 224 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 APOBEC3GQ9HC16 384 aaKnown RBP19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 XPNPEP3Q9NQH7 507 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 MRFAP1Q9Y605 127 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SCN10AQ9Y5Y9 1956 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 BRCA2P51587 3418 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 TMCO5BA8MYB1 307 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SGPL1O95470 568 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 TMEM191BP0C7N4 346 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 KRT5P13647 590 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 NOP14P78316 857 aaKnown RBP19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SURF1Q15526 300 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SLC47A2Q86VL8 602 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 PALB2Q86YC2 1186 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 LRRN4CLQ8ND94 238 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SLC30A5Q8TAD4 765 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 EPS8L1Q8TE68 723 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SRRDQ9UH36 339 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 UMODL1Q5DID0 1318 aa19.16■□□□□ 0.66
CHRNA4-206ENST00000498043 SLU7O95391 586 aaKnown RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 VEGFBP49765 207 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 AP3M2P53677 418 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 DUOXA2Q1HG44 320 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 C10orf76Q5T2E6 689 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 ENOSF1Q7L5Y1 443 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 CATSPER4Q7RTX7 472 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 TRAPPC11Q7Z392 1133 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 NOP9Q86U38 636 aaKnown RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 AGPAT1Q99943 283 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 ADPGKQ9BRR6 497 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 CFHR5Q9BXR6 569 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 A0A1B0GUA9 196 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 MEFVO15553 781 aaPredicted RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 KPNA6O60684 536 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 TACC1O75410 805 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 ATP1A1P05023 1023 aaKnown RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 CLTAP09496 248 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 TNFAIP3P21580 790 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 HOXC8P31273 242 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 NAP1L1P55209 391 aaKnown RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 TAF3Q5VWG9 929 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 RPUSD2Q8IZ73 545 aaKnown RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 TRIM58Q8NG06 486 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 IMPG2Q9BZV3 1241 aa19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 NOCTQ9UK39 431 aaKnown RBP19.15■□□□□ 0.66
CHRNA4-206ENST00000498043 B4GALT4O60513 344 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 ADAMTS4O75173 837 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 IL18RAPO95256 599 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 CST3P01034 146 aaPredicted RBP19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 NFICP08651 508 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 GNAT1P11488 350 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 DARSP14868 501 aaKnown RBP19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 CDC42EP1Q00587 391 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 TMEM40Q8WWA1 233 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 ALS2CR12Q96Q35 445 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 NUB1Q9Y5A7 615 aa19.14■□□□□ 0.65
CHRNA4-206ENST00000498043 PDE6CP51160 858 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 CUL2Q13617 745 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 NBPF20Q3BBV1 942 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 ANKRD36BP1Q96IX9 119 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 FAM81BQ96LP2 452 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 NOX5Q96PH1 765 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 TAS2R14Q9NYV8 317 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 LACTBL1A8MY62 500 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 CTIFO43310 598 aaKnown RBP19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 NPTXRO95502 500 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 CALCAP01258 141 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 TNNC2P02585 160 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 TFRCP02786 760 aaKnown RBP19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 H2AFZP0C0S5 128 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 CYP11B1P15538 503 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 EIF4BP23588 611 aaKnown RBP19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 MYL6P60660 151 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 SNX17Q15036 470 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 FAM47CQ5HY64 1035 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 JADE1Q6IE81 842 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 H2AFVQ71UI9 128 aa19.13■□□□□ 0.65
CHRNA4-206ENST00000498043 TMEM130Q8N3G9 435 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms