RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 F5P12259 2224 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 MCM7P33993 719 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 RBM25P49756 843 aaKnown RBP23.97■■□□□ 1.43
CLIC4-204ENST00000497755 CLCNKBP51801 687 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 PFKPQ01813 784 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 PUM1Q14671 1186 aaKnown RBP eCLIP23.97■■□□□ 1.43
CLIC4-204ENST00000497755 POTEHQ6S545 545 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 RTL10Q7L3V2 364 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 DEPTORQ8TB45 409 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 PPP1R10Q96QC0 940 aaKnown RBP23.97■■□□□ 1.43
CLIC4-204ENST00000497755 POLD4Q9HCU8 107 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 LTB4R2Q9NPC1 389 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 BACE2Q9Y5Z0 518 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 CDY1Q9Y6F8 540 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 LAMTOR5O43504 91 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 RPA1P27694 616 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 UPP1Q16831 310 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 GLRA4Q5JXX5 417 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 NT5DC1Q5TFE4 455 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 ING5Q8WYH8 240 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 PLA2G2FQ9BZM2 168 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 DLL3Q9NYJ7 618 aa23.96■■□□□ 1.43
CLIC4-204ENST00000497755 ARHGEF35A5YM69 484 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 TKTP29401 623 aaKnown RBP23.95■■□□□ 1.42
CLIC4-204ENST00000497755 ANAPC15P60006 121 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 CSTF1Q05048 431 aaKnown RBP23.95■■□□□ 1.42
CLIC4-204ENST00000497755 DCAF4L1Q3SXM0 396 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 CLDN23Q96B33 292 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 MCRS1Q96EZ8 462 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 BORCS6Q96GS4 357 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 KIFC3Q9BVG8 833 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 MRPS23Q9Y3D9 190 aaKnown RBP23.95■■□□□ 1.42
CLIC4-204ENST00000497755 SPTBN2O15020 2390 aa23.95■■□□□ 1.42
CLIC4-204ENST00000497755 PATJQ8NI35 1801 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 I3L4J1 428 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 ECI2O75521 394 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 RHOP08100 348 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 TRIM29Q14134 588 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 SLC5A9Q2M3M2 681 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 ZBTB41Q5SVQ8 909 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 C3orf58Q8NDZ4 430 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 DDX27Q96GQ7 796 aaKnown RBP23.94■■□□□ 1.42
CLIC4-204ENST00000497755 GOLGA2P5Q9HBQ8 144 aa23.94■■□□□ 1.42
CLIC4-204ENST00000497755 MAGEA9P43362 315 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 BRCC3P46736 316 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 EFNA5P52803 228 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 FZD5Q13467 585 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 PPP2R5AQ15172 486 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 VARS2Q5ST30 1063 aaKnown RBP23.93■■□□□ 1.42
CLIC4-204ENST00000497755 ATF7IP2Q5U623 682 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 ANKS3Q6ZW76 656 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 UROC1Q96N76 676 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 NELL2Q99435 816 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 AVENQ9NQS1 362 aaPredicted RBP23.93■■□□□ 1.42
CLIC4-204ENST00000497755 GDE1Q9NZC3 331 aa23.93■■□□□ 1.42
CLIC4-204ENST00000497755 DAXXQ9UER7 740 aaPredicted RBP23.93■■□□□ 1.42
CLIC4-204ENST00000497755 TPRP12270 2363 aaKnown RBP23.92■■□□□ 1.42
CLIC4-204ENST00000497755 SMIM28A0A1B0GU29 152 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 SHISA7A6NL88 538 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 TRAPPC3O43617 180 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 TARSP26639 723 aaKnown RBP23.92■■□□□ 1.42
CLIC4-204ENST00000497755 ECM1Q16610 540 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 TANGO2Q6ICL3 276 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 TPRG1Q6ZUI0 275 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 ZBTB44Q8NCP5 570 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 ZNF461Q8TAF7 563 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 ATRIPQ8WXE1 791 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 NELL1Q92832 810 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 PCDHGA2Q9Y5H1 932 aa23.92■■□□□ 1.42
CLIC4-204ENST00000497755 ARHGEF37A1IGU5 675 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 SPTLC1O15269 473 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 ABLIM3O94929 683 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 PTPN2P17706 415 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 SOX4Q06945 474 aaPredicted RBP23.91■■□□□ 1.42
CLIC4-204ENST00000497755 ZNF174Q15697 407 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 RSPO4Q2I0M5 234 aaPredicted RBP23.91■■□□□ 1.42
CLIC4-204ENST00000497755 XKR4Q5GH76 650 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 SLC8B1Q6J4K2 584 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 ALKAL1Q6UXT8 129 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 ERMNQ8TAM6 284 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 IFT74Q96LB3 600 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 HEBP1Q9NRV9 189 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 ZSCAN32Q9NX65 697 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 TNFSF13BQ9Y275 285 aa23.91■■□□□ 1.42
CLIC4-204ENST00000497755 K7ERI5 159 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 OR52Z1P0C646 297 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 CEBPBP17676 345 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 RPS9P46781 194 aaKnown RBP23.9■■□□□ 1.42
CLIC4-204ENST00000497755 ROR1Q01973 937 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 GUCY1B3Q02153 619 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 CEP120Q8N960 986 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 ELSPBP1Q96BH3 223 aa23.9■■□□□ 1.42
CLIC4-204ENST00000497755 WDR27A2RRH5 827 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 NCAM2O15394 837 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 TBC1D4O60343 1298 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 LILRB5O75023 590 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 MUTP22033 750 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 ST3GAL1Q11201 340 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 PRSS36Q5K4E3 855 aa23.89■■□□□ 1.41
CLIC4-204ENST00000497755 TSSK4Q6SA08 328 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms