RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 TRIM21P19474 475 aaKnown RBP15.36■□□□□ 0.05
VPS26A-209ENST00000497564 CASP14P31944 242 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 KLK7P49862 253 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 MXI1P50539 228 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 AP3M2P53677 418 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 CBWD6Q4V339 395 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 CBWD3Q5JTY5 395 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 CBWD5Q5RIA9 395 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 SLC27A1Q6PCB7 646 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 C15orf39Q6ZRI6 1047 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 FAM228AQ86W67 206 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 NEK11Q8NG66 645 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 PCMTD1Q96MG8 357 aaPredicted RBP15.36■□□□□ 0.05
VPS26A-209ENST00000497564 PANX2Q96RD6 677 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 CGRRF1Q99675 332 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 TMEM117Q9H0C3 514 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 KCNF1Q9H3M0 494 aa15.36■□□□□ 0.05
VPS26A-209ENST00000497564 TDRD15B5MCY1 1934 aaKnown RBP15.36■□□□□ 0.05
VPS26A-209ENST00000497564 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 NOL4O94818 638 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 IL18RAPO95256 599 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 ATP2A2P16615 1042 aaKnown RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 FGFR4P22455 802 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 FECHP22830 423 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 PON1P27169 355 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 TNFSF9P41273 254 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 GRM5P41594 1212 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 GCLMP48507 274 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 CETN1Q12798 172 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 GRIN2CQ14957 1233 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 KRT39Q6A163 491 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 CCDC112Q8NEF3 446 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 CCDC127Q96BQ5 260 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 TIFAQ96CG3 184 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 CDX2Q99626 313 aaPredicted RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 GANQ9H2C0 597 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 NKX2-4Q9H2Z4 354 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 GCNT4Q9P109 453 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 CEP72Q9P209 647 aa15.35■□□□□ 0.05
VPS26A-209ENST00000497564 LUC7L2Q9Y383 392 aaKnown RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 NOC2LQ9Y3T9 749 aaKnown RBP15.35■□□□□ 0.05
VPS26A-209ENST00000497564 RPS6KA5O75582 802 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 ARHGEF15O94989 841 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 ACTN1P12814 892 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 SLC9A1P19634 815 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 WNT7BP56706 349 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 WDR5P61964 334 aaKnown RBP15.34■□□□□ 0.05
VPS26A-209ENST00000497564 DEFB103AP81534 67 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 ZBED6P86452 979 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 ENOX2Q16206 610 aaKnown RBP15.34■□□□□ 0.05
VPS26A-209ENST00000497564 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 TRIM65Q6PJ69 517 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 CDR2LQ86X02 465 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-209ENST00000497564 WDR49Q8IV35 697 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 CEP120Q8N960 986 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 USP38Q8NB14 1042 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 EHBP1Q8NDI1 1231 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 LMO3Q8TAP4 145 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 MYLIPQ8WY64 445 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 TMX1Q9H3N1 280 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
VPS26A-209ENST00000497564 PDE11AQ9HCR9 933 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 SIX2Q9NPC8 291 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 CHST12Q9NRB3 414 aa15.34■□□□□ 0.05
VPS26A-209ENST00000497564 FAM207AQ9NSI2 230 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-209ENST00000497564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
VPS26A-209ENST00000497564 VCANP13611 3396 aa15.33■□□□□ 0.05
VPS26A-209ENST00000497564 RNF225M0QZC1 329 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 EPHB6O15197 1021 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 NRDCO43847 1150 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 C4BPAP04003 597 aaKnown RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 RFX1P22670 979 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 KRT9P35527 623 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 ADKP55263 362 aaKnown RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 CCZ1BP86790 482 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 CCZ1P86791 482 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 ZACNQ401N2 412 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 SEZ6Q53EL9 994 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 CNKSR3Q6P9H4 555 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 SV2AQ7L0J3 742 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 ZNF397Q8NF99 534 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 DBF4BQ8NFT6 615 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 BAP1Q92560 729 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 ZNF516Q92618 1163 aa15.33■□□□□ 0.04
VPS26A-209ENST00000497564 POP1Q99575 1024 aaKnown RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 INTS2Q9H0H0 1204 aaKnown RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 NUCKS1Q9H1E3 243 aaKnown RBP15.33■□□□□ 0.04
VPS26A-209ENST00000497564 ZNF576Q9H609 170 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms