RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 C2CD2Q9Y426 696 aa13.14□□□□□ -0.31
HPS1-213ENST00000497527 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
HPS1-213ENST00000497527 A0A1W2PQ45 241 aaPredicted RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 A0A1W2PQY0 241 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 GPR182O15218 404 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 LCA5LO95447 670 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 NPTXRO95502 500 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 CXCL8P10145 99 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 KIF11P52732 1056 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 OSTNP61366 133 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 SGSM1Q2NKQ1 1148 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 SEZ6Q53EL9 994 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 TDRD10Q5VZ19 366 aaKnown RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 PHLDB3Q6NSJ2 640 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 ZNF662Q6ZS27 426 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 KIAA1328Q86T90 577 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 CDR2LQ86X02 465 aaPredicted RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 PPP1R13LQ8WUF5 828 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 ZNF516Q92618 1163 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 TSGA10Q9BZW7 698 aa13.13□□□□□ -0.31
HPS1-213ENST00000497527 SENP6Q9GZR1 1112 aaPredicted RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 RRAGDQ9NQL2 400 aaPredicted RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 PAK6Q9NQU5 681 aaPredicted RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
HPS1-213ENST00000497527 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
HPS1-213ENST00000497527 THPOP40225 353 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
HPS1-213ENST00000497527 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
HPS1-213ENST00000497527 APBA1Q02410 837 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 NCOA4Q13772 614 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 MTF1Q14872 753 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 ARHGAP44Q17R89 818 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 FAM26DQ5JW98 314 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
HPS1-213ENST00000497527 TRAPPC11Q7Z392 1133 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
HPS1-213ENST00000497527 CEP120Q8N960 986 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 SLC43A3Q8NBI5 491 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 SH3TC2Q8TF17 1288 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 DHX38Q92620 1227 aaKnown RBP13.12□□□□□ -0.31
HPS1-213ENST00000497527 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 HAUS4Q9H6D7 363 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 CDHR5Q9HBB8 845 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
HPS1-213ENST00000497527 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 ARVCFO00192 962 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 EVI5O60447 810 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 CLSTN1O94985 981 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 CAPN2P17655 700 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 FGFR4P22455 802 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 ATICP31939 592 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 RAB27AP51159 221 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 BPIFB4P59827 614 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 ARID5AQ03989 594 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 MGAT3Q09327 533 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 LMBRD2Q68DH5 695 aaPredicted RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 IRF2BP2Q7Z5L9 587 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 CTU1Q7Z7A3 348 aaKnown RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 ARHGEF19Q8IW93 802 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 OR5B17Q8NGF7 314 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 SHC3Q92529 594 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 FAM124BQ9H5Z6 455 aaPredicted RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
HPS1-213ENST00000497527 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
HPS1-213ENST00000497527 USP27XA6NNY8 438 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 KRT86O43790 486 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
HPS1-213ENST00000497527 CTSHP09668 335 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 CCL5P13501 91 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 P4HA1P13674 534 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 VAV2P52735 878 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 WNT7BP56706 349 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 NOP14P78316 857 aaKnown RBP13.1□□□□□ -0.31
HPS1-213ENST00000497527 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 PAK2Q13177 524 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 BFSP2Q13515 415 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
HPS1-213ENST00000497527 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms