RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 SUPT20HQ8NEM7 779 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 PHACTR3Q96KR7 559 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SLC2A13Q96QE2 648 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 MRI1Q9BV20 369 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SENP6Q9GZR1 1112 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SERHL2Q9H4I8 314 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 ZNF277Q9NRM2 450 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-208ENST00000497022 LANCL2Q9NS86 450 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 MOCS1Q9NZB8 636 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 ANKFY1Q9P2R3 1169 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SIK3Q9Y2K2 1263 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 USP15Q9Y4E8 981 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-208ENST00000497022 GPR45Q9Y5Y3 372 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SPATA31A6Q5VVP1 1343 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 HLA-DOAP06340 250 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 RAP2AP10114 183 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 AGXTP21549 392 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 AVPR1BP47901 424 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 SLC6A9P48067 706 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 RAP2BP61225 183 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 KLF1Q13351 362 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-208ENST00000497022 MED25Q71SY5 747 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 CPEB3Q8NE35 698 aaKnown RBP4.5□□□□□ -1.69
VPS26A-208ENST00000497022 OR2I1PQ8NGU4 316 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS26A-208ENST00000497022 CASKIN2Q8WXE0 1202 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 ADAM2Q99965 735 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 WDR11Q9BZH6 1224 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 PRDM13Q9H4Q3 707 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 LDAHQ9H6V9 325 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 SPC25Q9HBM1 224 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 SLC5A4Q9NY91 659 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 FAM30AQ9NZY2 134 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 MCM8Q9UJA3 840 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 AJAP1Q9UKB5 411 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-208ENST00000497022 ATP11BQ9Y2G3 1177 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 MAP3K2Q9Y2U5 619 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 INSL6Q9Y581 213 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 FPGT-TNNI3KV9GXZ4 949 aa4.5□□□□□ -1.69
VPS26A-208ENST00000497022 TRIM75PA6NK02 468 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 MARCH11A6NNE9 402 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 IGSF3O75054 1194 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 TYRP1P17643 537 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 ATP5JP18859 108 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 FPR1P21462 350 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 DDX6P26196 483 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS26A-208ENST00000497022 ALDH1A3P47895 512 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 GUCY1B3Q02153 619 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 RESTQ13127 1097 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 TSHZ3Q63HK5 1081 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 OTUD7BQ6GQQ9 843 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 FBXO42Q6P3S6 717 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 RHOT2Q8IXI1 618 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 DRC7Q8IY82 874 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 CNTD1Q8N815 330 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 OR56A1Q8NGH5 318 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 CYFIP2Q96F07 1278 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 COQ10AQ96MF6 247 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 PUS7LQ9H0K6 701 aaKnown RBP4.49□□□□□ -1.69
VPS26A-208ENST00000497022 TMEM140Q9NV12 185 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 SLC23A1Q9UHI7 598 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 DNM3Q9UQ16 869 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 ATP8A1Q9Y2Q0 1164 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 ACTL7AQ9Y615 435 aa4.49□□□□□ -1.69
VPS26A-208ENST00000497022 PIPSLA2A3N6 862 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 UNC119BA6NIH7 251 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 FAM171A2A8MVW0 826 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 POMCP01189 267 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 CFIP05156 583 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 ELANEP08246 267 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 PCSK1P29120 753 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 UBXN2BQ14CS0 331 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 ERCC6LQ2NKX8 1250 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 INAVAQ3KP66 663 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 PRR16Q569H4 304 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 SEM1Q6ZVN7 128 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 NECAB2Q7Z6G3 386 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 LCORLQ8N3X6 602 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 CCHCR1Q8TD31 782 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 MYOCQ99972 504 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 KLHL11Q9NVR0 708 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 SYBUQ9NX95 663 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 SBNO2Q9Y2G9 1366 aa4.48□□□□□ -1.69
VPS26A-208ENST00000497022 TEX33O43247 280 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 GPR32O75388 356 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 SPDEFO95238 335 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 C1RP00736 705 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 AMY1AP04745 511 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 CTGFP29279 349 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 ELLP55199 621 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 TP53BP2Q13625 1128 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 ARMC6Q6NXE6 501 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 ZNF529Q6P280 563 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 MAPKAPK5Q8IW41 473 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 CMTR2Q8IYT2 770 aaKnown RBP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 CBARPQ8N350 705 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 TMEM132CQ8N3T6 1108 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms