RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 POMCP01189 267 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 TNNI1P19237 187 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 GATMP50440 423 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 AFF1P51825 1210 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 MCCD1P59942 119 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 RNASELQ05823 741 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 GLRA4Q5JXX5 417 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 CDKAL1Q5VV42 579 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 JADE1Q6IE81 842 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 CHRDL2Q6WN34 429 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 LUZP1Q86V48 1076 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 CMTR2Q8IYT2 770 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 CACTINQ8WUQ7 758 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 ZMAT2Q96NC0 199 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 PPP1R10Q96QC0 940 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 CXCL16Q9H2A7 254 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 MIOSQ9NXC5 875 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 UBQLN1Q9UMX0 589 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 ANK1P16157 1881 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 FNDC1Q4ZHG4 1894 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 TLL1O43897 1013 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 EEF1GP26641 437 aaKnown RBP23.57■■□□□ 1.36
C9orf3-222ENST00000496567 WNT7BP56706 349 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 CLDN10P78369 228 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 SPAG1Q07617 926 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 LRRC43Q8N309 656 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 TBC1D13Q9NVG8 400 aa23.57■■□□□ 1.36
C9orf3-222ENST00000496567 TRIP11Q15643 1979 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 LRRIQ3A6PVS8 624 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-222ENST00000496567 KCNJ18B7U540 433 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 STX10O60499 249 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 NFICP08651 508 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 MTIF2P46199 727 aaKnown RBP23.56■■□□□ 1.36
C9orf3-222ENST00000496567 AP3M2P53677 418 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 TFAMQ00059 246 aaKnown RBP23.56■■□□□ 1.36
C9orf3-222ENST00000496567 BTG3Q14201 252 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-222ENST00000496567 KCNJ12Q14500 433 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 DUOXA2Q1HG44 320 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 PAN2Q504Q3 1202 aaKnown RBP23.56■■□□□ 1.36
C9orf3-222ENST00000496567 HSP90AA4PQ58FG1 418 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 TCP11X2Q5H9J9 407 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 TCERG1LQ5VWI1 586 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 TRIM59Q8IWR1 403 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 EFCAB13Q8IY85 973 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 ANKRD20A12PQ8NF67 263 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 BEST2Q8NFU1 509 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 PLEKHO2Q8TD55 490 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 ANKRD36BP1Q96IX9 119 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 FAM193BQ96PV7 902 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-222ENST00000496567 PRO3102Q9H379 93 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 INTS13Q9NVM9 706 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 PLAGL2Q9UPG8 496 aa23.56■■□□□ 1.36
C9orf3-222ENST00000496567 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-222ENST00000496567 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-222ENST00000496567 TMEM191BP0C7N4 346 aa23.55■■□□□ 1.36
C9orf3-222ENST00000496567 CYP3A5P20815 502 aa23.55■■□□□ 1.36
C9orf3-222ENST00000496567 CDK11BP21127 795 aaKnown RBP23.55■■□□□ 1.36
C9orf3-222ENST00000496567 ZBTB6Q15916 424 aa23.55■■□□□ 1.36
C9orf3-222ENST00000496567 DCAF17Q5H9S7 520 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-222ENST00000496567 POP1Q99575 1024 aaKnown RBP23.55■■□□□ 1.36
C9orf3-222ENST00000496567 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.55■■□□□ 1.36
C9orf3-222ENST00000496567 TDRD15B5MCY1 1934 aaKnown RBP23.54■■□□□ 1.36
C9orf3-222ENST00000496567 TNNC2P02585 160 aa23.54■■□□□ 1.36
C9orf3-222ENST00000496567 ZNF18P17022 549 aa23.54■■□□□ 1.36
C9orf3-222ENST00000496567 DLG4P78352 724 aa23.54■■□□□ 1.36
C9orf3-222ENST00000496567 HSD3B7Q9H2F3 369 aa23.54■■□□□ 1.36
C9orf3-222ENST00000496567 PDCD11Q14690 1871 aaKnown RBP23.54■■□□□ 1.36
C9orf3-222ENST00000496567 TRIM49P0CI25 452 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 TRIM49CP0CI26 452 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 GTF2H1P32780 548 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 TUSC3Q13454 348 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 NAB2Q15742 525 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 LMBRD2Q68DH5 695 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-222ENST00000496567 RNF214Q8ND24 703 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 SLC35C1Q96A29 364 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 COL4A6Q14031 1691 aa23.53■■□□□ 1.36
C9orf3-222ENST00000496567 C1orf220Q5T0J3 134 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 FIBCD1Q8N539 461 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 C18orf25Q96B23 403 aaPredicted RBP23.52■■□□□ 1.36
C9orf3-222ENST00000496567 TUBGCP2Q9BSJ2 902 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 MTMR12Q9C0I1 747 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 PCDHA11Q9Y5I1 949 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 PTPRJQ12913 1337 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 A0A1W2PPC1 479 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 DDHD2O94830 711 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 TPM2P07951 284 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 DSC1Q08554 894 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 MAN2A1Q16706 1144 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 ZNF280BQ86YH2 543 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 OR5B17Q8NGF7 314 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 SP7Q8TDD2 431 aaPredicted RBP23.52■■□□□ 1.36
C9orf3-222ENST00000496567 UROC1Q96N76 676 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 NRDE2Q9H7Z3 1164 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 DPP3Q9NY33 737 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 TUBGCP4Q9UGJ1 667 aa23.52■■□□□ 1.36
C9orf3-222ENST00000496567 CARNS1A5YM72 827 aa23.51■■□□□ 1.35
C9orf3-222ENST00000496567 PRKCSHP14314 528 aaPredicted RBP23.51■■□□□ 1.35
C9orf3-222ENST00000496567 RPL9P32969 192 aaKnown RBP23.51■■□□□ 1.35
C9orf3-222ENST00000496567 RABGGTBP53611 331 aa23.51■■□□□ 1.35
C9orf3-222ENST00000496567 SPOUT1Q5T280 376 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms