RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 LOC730098B7Z3J9 87 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 B3GAT3O94766 335 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 ALADP13716 330 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 CLCNKBP51801 687 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 UPP1Q16831 310 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 SLC10A6Q3KNW5 377 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 ATAT1Q5SQI0 421 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 FAM171A1Q5VUB5 890 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 ZNF720Q7Z2F6 126 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 SFR1Q86XK3 245 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 PDILTQ8N807 584 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 HASPINQ8TF76 798 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 HDAC7Q8WUI4 952 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 SFXN1Q9H9B4 322 aa18.61■□□□□ 0.57
COMMD3-214ENST00000496071 PDCD11Q14690 1871 aaKnown RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 A0A087X0B3 334 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 OGTO15294 1046 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 GLUD1P00367 558 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 RPL9P32969 192 aaKnown RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 AMPD3Q01432 767 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 FOXD4L6Q3SYB3 417 aaPredicted RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 SEZ6Q53EL9 994 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 RARS2Q5T160 578 aaKnown RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 SLFN12LQ6IEE8 588 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 FOXD4L3Q6VB84 417 aaPredicted RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 CEP57Q86XR8 500 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 PIK3R5Q8WYR1 880 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 B3GALT6Q96L58 329 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 ZMAT2Q96NC0 199 aaKnown RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 TSPAN18Q96SJ8 248 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 HAPLN2Q9GZV7 340 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 EPHX3Q9H6B9 360 aa18.6■□□□□ 0.57
COMMD3-214ENST00000496071 MRPL44Q9H9J2 332 aaKnown RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 MTCL1Q9Y4B5 1905 aaKnown RBP18.6■□□□□ 0.57
COMMD3-214ENST00000496071 A0A0B4J269 797 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 IDEP14735 1019 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 ME1P48163 572 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 PKP1Q13835 747 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 ZC2HC1CQ53FD0 456 aaPredicted RBP18.59■□□□□ 0.57
COMMD3-214ENST00000496071 RTP2Q5QGT7 225 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 C12orf76Q8N812 135 aaPredicted RBP18.59■□□□□ 0.57
COMMD3-214ENST00000496071 IQUBQ8NA54 791 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 KHSRPQ92945 711 aaKnown RBP eCLIP18.59■□□□□ 0.571e-11■■□□□ 14
COMMD3-214ENST00000496071 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 MSTO1Q9BUK6 570 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 TNMDQ9H2S6 317 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 PLEKHA4Q9H4M7 779 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 GOLGA2P5Q9HBQ8 144 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 OLFML3Q9NRN5 406 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 EXOC7Q9UPT5 735 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 NR2E1Q9Y466 385 aa18.59■□□□□ 0.57
COMMD3-214ENST00000496071 PLXNA3P51805 1871 aa18.58■□□□□ 0.57
COMMD3-214ENST00000496071 TTC26A0AVF1 554 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 XPOTO43592 962 aaKnown RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 DCXO43602 365 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 CXCL8P10145 99 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 FGFR3P22607 806 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 PPP2R3AQ06190 1150 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 SOX4Q06945 474 aaPredicted RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 ALCAMQ13740 583 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 POSTNQ15063 836 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 PSMD5Q16401 504 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 HERC4Q5GLZ8 1057 aaPredicted RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 AXDND1Q5T1B0 1012 aaPredicted RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 SHC4Q6S5L8 630 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 PRSS55Q6UWB4 352 aaPredicted RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 CYP26C1Q6V0L0 522 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 C15orf39Q6ZRI6 1047 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 GPR149Q86SP6 731 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 CD302Q8IX05 232 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 CCDC65Q8IXS2 484 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 CMASQ8NFW8 434 aaPredicted RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 LNX1Q8TBB1 728 aaPredicted RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 STRA6Q9BX79 667 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 RPF1Q9H9Y2 349 aaKnown RBP18.58■□□□□ 0.56
COMMD3-214ENST00000496071 MAN1C1Q9NR34 630 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 PANK4Q9NVE7 773 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 KBTBD4Q9NVX7 518 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 RCOR1Q9UKL0 485 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 PCDHA7Q9UN72 937 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 PCDHB13Q9Y5F0 798 aa18.58■□□□□ 0.56
COMMD3-214ENST00000496071 FRMD3A2A2Y4 597 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 PODXLO00592 558 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 MEFVO15553 781 aaPredicted RBP18.57■□□□□ 0.56
COMMD3-214ENST00000496071 PPP1R37O75864 691 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 ADRB2P07550 413 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 DNM1Q05193 864 aaKnown RBP18.57■□□□□ 0.56
COMMD3-214ENST00000496071 E2F4Q16254 413 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 SLC39A4Q6P5W5 647 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 LILRA6Q6PI73 481 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 CD300LGQ6UXG3 332 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 TMC5Q6UXY8 1006 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 PALB2Q86YC2 1186 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 ACCSQ96QU6 501 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 PYM1Q9BRP8 204 aaKnown RBP18.57■□□□□ 0.56
COMMD3-214ENST00000496071 RHOBTB2Q9BYZ6 727 aa18.57■□□□□ 0.56
COMMD3-214ENST00000496071 POMKQ9H5K3 350 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms