RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 M0R296 226 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 DDHD2O94830 711 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 CLTAP09496 248 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 HARSP12081 509 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 GARTP22102 1010 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 MLH1P40692 756 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 PRCPP42785 496 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 NAB2Q15742 525 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 SMAD2Q15796 467 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 ENOX2Q16206 610 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 PTPROQ16827 1216 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 COBLL1Q53SF7 1204 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 ISM2Q6H9L7 571 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 ZNF280BQ86YH2 543 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 GUF1Q8N442 669 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 FIBCD1Q8N539 461 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 TMEM174Q8WUU8 243 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 PBXIP1Q96AQ6 731 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 CPSF3Q9UKF6 684 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 AGO2Q9UKV8 859 aaKnown RBP12.97□□□□□ -0.33
APTX-233ENST00000496030 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 ANK1P16157 1881 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 TTC26A0AVF1 554 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 H3BNC9 293 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 BIN1O00499 593 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 PDXKO00764 312 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 MBTPS2O43462 519 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 POMCP01189 267 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 BMPR1AP36894 532 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 ACOT2P49753 483 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 SCNN1GP51170 649 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 WNT7BP56706 349 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 SNRPFP62306 86 aaKnown RBP12.96□□□□□ -0.33
APTX-233ENST00000496030 DSC1Q08554 894 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 GPM6BQ13491 265 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 ZCWPW2Q504Y3 356 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.33
APTX-233ENST00000496030 TRIM67Q6ZTA4 783 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 C12orf56Q8IXR9 622 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 HACE1Q8IYU2 909 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 RSPH1Q8WYR4 309 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 POMGNT1Q8WZA1 660 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 ACAP3Q96P50 834 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
APTX-233ENST00000496030 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.33
APTX-233ENST00000496030 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 DMAC2Q9NW81 257 aa12.96□□□□□ -0.33
APTX-233ENST00000496030 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.34
APTX-233ENST00000496030 RALGAPA2Q2PPJ7 1873 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 CLIC2O15247 247 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 MBD3O95983 291 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 CXCL8P10145 99 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 KCNE1P15382 129 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.34
APTX-233ENST00000496030 VCPP55072 806 aaKnown RBP12.95□□□□□ -0.34
APTX-233ENST00000496030 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 LRRC43Q8N309 656 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 SAAL1Q96ER3 474 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 PPP1R10Q96QC0 940 aaKnown RBP12.95□□□□□ -0.34
APTX-233ENST00000496030 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 HSPBP1Q9NZL4 362 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 CGNQ9P2M7 1197 aaKnown RBP12.95□□□□□ -0.34
APTX-233ENST00000496030 KANSL3Q9P2N6 904 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 DNAJB4Q9UDY4 337 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 TRAF3IP3Q9Y228 551 aa12.95□□□□□ -0.34
APTX-233ENST00000496030 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
APTX-233ENST00000496030 GOLGA8IPA6NC78 632 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 GOLGA8JA6NMD2 632 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 C5orf67F2Z3F1 127 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 EXTL3O43909 919 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 TBX10O75333 385 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
APTX-233ENST00000496030 PMS1P54277 932 aaKnown RBP12.94□□□□□ -0.34
APTX-233ENST00000496030 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
APTX-233ENST00000496030 KYAT1Q16773 422 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 CENPPQ6IPU0 288 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 ARMCX5Q6P1M9 558 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 SLC9A9Q8IVB4 645 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 TMEM130Q8N3G9 435 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 FBXL6Q8N531 539 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
APTX-233ENST00000496030 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms