RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	POSTN	Q15063	836 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	ARSI	Q5FYB1	569 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	STXBP4	Q6ZWJ1	553 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	RNF168	Q8IYW5	571 aa	Predicted RBP	13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	CEP57L1	Q8IYX8	460 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	STAM	Q92783	540 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	SNX27	Q96L92	541 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	ACCS	Q96QU6	501 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	VN1R3	Q9BXE9	311 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	HAPLN2	Q9GZV7	340 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	CXCL16	Q9H2A7	254 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	MRPL17	Q9NRX2	175 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	CNTN3	Q9P232	1028 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	ADAM28	Q9UKQ2	775 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	KIAA1671	Q9BY89	1806 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	PVALEF	A0A1B0GWK0	134 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	OGT	O15294	1046 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	FAM189A1	O60320	539 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	HARS	P12081	509 aa	Known RBP	13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	KCNC3	Q14003	757 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	SLC10A6	Q3KNW5	377 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	L1TD1	Q5T7N2	865 aa	Known RBP	13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	SLC39A4	Q6P5W5	647 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	DCLRE1A	Q6PJP8	1040 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	EP400NL	Q6ZTU2	488 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	TMEM87A	Q8NBN3	555 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	CHAMP1	Q96JM3	812 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	MSTO1	Q9BUK6	570 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	HERC2P3	Q9BVR0	1158 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	EMILIN2	Q9BXX0	1053 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	TMEM206	Q9H813	350 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	CHST7	Q9NS84	486 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	FAM50B	Q9Y247	325 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	HPSE	Q9Y251	543 aa		13.49	□□□□□ -0.25
MRPL55-233	ENST00000495899	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	2e-7	■■■■■ 129.2
MRPL55-233	ENST00000495899	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899		A0A1B0GVL5	298 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	TTC26	A0AVF1	554 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	CASTOR2	A6NHX0	329 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	TMEM189-UBE2V1	I3L0A0	370 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	LINC01565	O15544	149 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	LILRB3	O75022	631 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	GCNT3	O95395	438 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	C1R	P00736	705 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	MYL1	P05976	194 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	UROD	P06132	367 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	ADRB2	P07550	413 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	PFKFB1	P16118	471 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	RPL9	P32969	192 aa	Known RBP	13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	GLUD2	P49448	558 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	NDUFV1	P49821	464 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	KCNQ1	P51787	676 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	ASIC1	P78348	528 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	ELAVL2	Q12926	359 aa	Known RBP	13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	COASY	Q13057	564 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	PTPN14	Q15678	1187 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	UPP1	Q16831	310 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	USP41	Q3LFD5	358 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	KIAA0319	Q5VV43	1072 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	KIAA1841	Q6NSI8	718 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	FUT10	Q6P4F1	479 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	PPFIBP1	Q86W92	1011 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	CD302	Q8IX05	232 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	MSLNL	Q96KJ4	702 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	ZMAT2	Q96NC0	199 aa	Known RBP	13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	PAAF1	Q9BRP4	392 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	TBC1D7	Q9P0N9	293 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	CLEC1B	Q9P126	229 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	CPSF3	Q9UKF6	684 aa	Known RBP	13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	MYH15	Q9Y2K3	1946 aa		13.48	□□□□□ -0.25
MRPL55-233	ENST00000495899	ANKRD63	C9JTQ0	380 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899		F8W810	466 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899		H3BQ06	376 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	MEFV	O15553	781 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	TRAPPC3	O43617	180 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	ACTN4	O43707	911 aa	Known RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	CLASP2	O75122	1294 aa	Known RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	TBX10	O75333	385 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	GLP2R	O95838	553 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	HOXB8	P17481	243 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	DSG1	Q02413	1049 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	CREM	Q03060	361 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	DLX2	Q07687	328 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	SEZ6	Q53EL9	994 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	GLRA4	Q5JXX5	417 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	UNC13D	Q70J99	1090 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	TAS1R1	Q7RTX1	841 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	SYCP3	Q8IZU3	236 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	CASP10	Q92851	521 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	PAGE5	Q96GU1	130 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	GPR62	Q9BZJ7	368 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	RPF1	Q9H9Y2	349 aa	Known RBP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	RXFP1	Q9HBX9	757 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	SERTAD1	Q9UHV2	236 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	CD207	Q9UJ71	328 aa		13.47	□□□□□ -0.25
MRPL55-233	ENST00000495899	AGO2	Q9UKV8	859 aa	Known RBP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms