RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MYBP10242 640 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 TNFRSF1AP19438 455 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 CDC42EP1Q00587 391 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 LLGL1Q15334 1064 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 DARS2Q6PI48 645 aaKnown RBP7.34□□□□□ -1.23
CCDC39-207ENST00000495817 NPNTQ6UXI9 565 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 RNF207Q6ZRF8 634 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 Q6ZVL8 140 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 FAM156AQ8NDB6 213 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 ZNF480Q8WV37 535 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 RGMAQ96B86 450 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 IL17RAQ96F46 866 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 CDK5RAP3Q96JB5 506 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 PDCD2LQ9BRP1 358 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 B3GNT5Q9BYG0 378 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 BCO1Q9HAY6 547 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 FAM50BQ9Y247 325 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 MFAP3LO75121 409 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 ARIH2O95376 493 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 FTLP02792 175 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-207ENST00000495817 IFIT2P09913 472 aaKnown RBP7.33□□□□□ -1.24
CCDC39-207ENST00000495817 GNAT2P19087 354 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 ADSLP30566 484 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-207ENST00000495817 GZMKP49863 264 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 MAP2K6P52564 334 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 CACNB3P54284 484 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 DCAF17Q5H9S7 520 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-207ENST00000495817 GORABQ5T7V8 394 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 SPTY2D1Q68D10 685 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-207ENST00000495817 CCDC149Q6ZUS6 474 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 DAAM2Q86T65 1068 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 RHOT1Q8IXI2 618 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 OR5M3Q8NGP4 307 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 TDP1Q9NUW8 608 aa7.33□□□□□ -1.24
CCDC39-207ENST00000495817 HECAQ9UBI9 543 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-207ENST00000495817 A0A088AWK7 358 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 CAPN8A6NHC0 703 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 GOLIM4O00461 696 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 MATN3O15232 486 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 PMM2O15305 246 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 CRHR1P34998 444 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 SLC6A9P48067 706 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 NEK3P51956 506 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 HK3P52790 923 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 ZNF280AP59817 542 aaPredicted RBP7.32□□□□□ -1.24
CCDC39-207ENST00000495817 GPSM2P81274 684 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 CRHR2Q13324 411 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 MRPL49Q13405 166 aaKnown RBP7.32□□□□□ -1.24
CCDC39-207ENST00000495817 SEMA5AQ13591 1074 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 MORC3Q14149 939 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 PUM1Q14671 1186 aaKnown RBP eCLIP7.32□□□□□ -1.24
CCDC39-207ENST00000495817 KIAA0753Q2KHM9 967 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 METTL24Q5JXM2 366 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 HTR3DQ70Z44 454 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 DOK3Q7L591 496 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 SMC5Q8IY18 1101 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 C3orf20Q8ND61 904 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 MDGA1Q8NFP4 955 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 OR7D4Q8NG98 312 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 KLHDC4Q8TBB5 520 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 ST8SIA2Q92186 375 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 FAM167AQ96KS9 214 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 STRBPQ96SI9 672 aaKnown RBP7.32□□□□□ -1.24
CCDC39-207ENST00000495817 CALCOCO1Q9P1Z2 691 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 SIK3Q9Y2K2 1263 aa7.32□□□□□ -1.24
CCDC39-207ENST00000495817 HOXA3O43365 443 aaPredicted RBP7.31□□□□□ -1.24
CCDC39-207ENST00000495817 CASRP41180 1078 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 HTR3AP46098 478 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 MAN2A2P49641 1150 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 NOGQ13253 232 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 RAB39AQ14964 217 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 LONRF3Q496Y0 759 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 USP39Q53GS9 565 aaKnown RBP7.31□□□□□ -1.24
CCDC39-207ENST00000495817 PDZD4Q76G19 769 aaPredicted RBP7.31□□□□□ -1.24
CCDC39-207ENST00000495817 SPRED1Q7Z699 444 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 GSPT2Q8IYD1 628 aaKnown RBP7.31□□□□□ -1.24
CCDC39-207ENST00000495817 MRGPRX4Q96LA9 322 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 DMRTA2Q96SC8 542 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 CDC5LQ99459 802 aaKnown RBP7.31□□□□□ -1.24
CCDC39-207ENST00000495817 ZNF703Q9H7S9 590 aaPredicted RBP7.31□□□□□ -1.24
CCDC39-207ENST00000495817 GPRC5DQ9NZD1 345 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 TRPS1Q9UHF7 1281 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 NR2E3Q9Y5X4 410 aa7.31□□□□□ -1.24
CCDC39-207ENST00000495817 LOC102724159A0A0B4J2E5 919 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 GOLGA6L6A8MZA4 724 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 SREBF1P36956 1147 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 PER3P56645 1201 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 PWP2Q15269 919 aaKnown RBP7.3□□□□□ -1.24
CCDC39-207ENST00000495817 RNF220Q5VTB9 566 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 NAIF1Q69YI7 327 aaPredicted RBP7.3□□□□□ -1.24
CCDC39-207ENST00000495817 GGNQ86UU5 652 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 ELAC2Q9BQ52 826 aaKnown RBP7.3□□□□□ -1.24
CCDC39-207ENST00000495817 PHTF1Q9UMS5 762 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 CLCA2Q9UQC9 943 aa7.3□□□□□ -1.24
CCDC39-207ENST00000495817 B5MCH6 92 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 ITGA10O75578 1167 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 LDHAP00338 332 aaKnown RBP7.29□□□□□ -1.24
CCDC39-207ENST00000495817 SLC5A1P13866 664 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms