RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PIK3CAP42336 1068 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 NAMPTP43490 491 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 PLTPP55058 493 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 NLRP11P59045 1033 aaKnown RBP16.42■□□□□ 0.22
CALD1-222ENST00000495522 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
CALD1-222ENST00000495522 SLFN12LQ6IEE8 588 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 CPNE8Q86YQ8 564 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 DEPTORQ8TB45 409 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 ASAP3Q8TDY4 903 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 TRIM11Q96F44 468 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 EPN3Q9H201 632 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 RABEP2Q9H5N1 569 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 AVENQ9NQS1 362 aaPredicted RBP16.42■□□□□ 0.22
CALD1-222ENST00000495522 GGA3Q9NZ52 723 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 PARP2Q9UGN5 583 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 C4BPAP04003 597 aaKnown RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 MYBL1P10243 752 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 GLRA2P23416 452 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 MAPK4P31152 587 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 ARL2P36404 184 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 COILP38432 576 aaPredicted RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 ZDHHC24Q6UX98 284 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 ZNF526Q8TF50 670 aaPredicted RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 SLC7A3Q8WY07 619 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 FAM107BQ9H098 131 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 GRHL1Q9NZI5 618 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 BCCIPQ9P287 314 aaKnown RBP eCLIP16.41■□□□□ 0.22
CALD1-222ENST00000495522 ANAPC7Q9UJX3 599 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 LRRIQ4A6NIV6 560 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 K7ERI5 159 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 CALCAP01258 141 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 FNTAP49354 379 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 ACOT2P49753 483 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 CORO7P57737 925 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 IFFO1Q0D2I5 559 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 KRT71Q3SY84 523 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 NLGN2Q8NFZ4 835 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 FBXO25Q8TCJ0 367 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 NIFKQ9BYG3 293 aaKnown RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 GEMIN8Q9NWZ8 242 aaKnown RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 FEZ2Q9UHY8 353 aaPredicted RBP16.41■□□□□ 0.22
CALD1-222ENST00000495522 SIP14410 1827 aa16.41■□□□□ 0.22
CALD1-222ENST00000495522 TCRBV7S2A1N4TA0A589 114 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 LDHAP00338 332 aaKnown RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 RARAP10276 462 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 RPL21P46778 160 aaKnown RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 PMS2P54278 862 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 CNTN2Q02246 1040 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 SIX1Q15475 284 aaPredicted RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 PTGISQ16647 500 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 CRELD2Q6UXH1 353 aaPredicted RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 SEPT14Q6ZU15 432 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 C10orf67Q8IYJ2 551 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 PABPC3Q9H361 631 aaKnown RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 MTRF1LQ9UGC7 380 aaKnown RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 TRIM66O15016 1216 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 NUDT17P0C025 328 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 ALDH5A1P51649 535 aaPredicted RBP16.4■□□□□ 0.22
CALD1-222ENST00000495522 WNT7BP56706 349 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 ODF2Q5BJF6 829 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.4■□□□□ 0.22
CALD1-222ENST00000495522 MSTO1Q9BUK6 570 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 HAPLN2Q9GZV7 340 aa16.4■□□□□ 0.22
CALD1-222ENST00000495522 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 VNN1O95497 513 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 RFC5P40937 340 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
CALD1-222ENST00000495522 CENPCQ03188 943 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 FSTL1Q12841 308 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 HOOK3Q86VS8 718 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 CPA5Q8WXQ8 436 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
CALD1-222ENST00000495522 CEP89Q96ST8 783 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 RASSF4Q9H2L5 321 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 FBXO40Q9UH90 709 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 NOVA2Q9UNW9 492 aaKnown RBP16.39■□□□□ 0.21
CALD1-222ENST00000495522 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
CALD1-222ENST00000495522 FSCN2O14926 492 aa16.38■□□□□ 0.21
CALD1-222ENST00000495522 CYP1A1P04798 512 aaPredicted RBP16.38■□□□□ 0.21
CALD1-222ENST00000495522 SLC1A1P43005 524 aa16.38■□□□□ 0.21
CALD1-222ENST00000495522 PPP2R2AP63151 447 aa16.38■□□□□ 0.21
CALD1-222ENST00000495522 CUL2Q13617 745 aa16.38■□□□□ 0.21
CALD1-222ENST00000495522 DENND2CQ68D51 928 aa16.38■□□□□ 0.21
CALD1-222ENST00000495522 B4GALNT4Q76KP1 1039 aa16.38■□□□□ 0.21
CALD1-222ENST00000495522 CGRRF1Q99675 332 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms