RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CYP2J2P51589 502 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 SPAG1Q07617 926 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 PDE12Q6L8Q7 609 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 TMC7Q7Z402 723 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 GUF1Q8N442 669 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 XXYLT1Q8NBI6 393 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 SPATA20Q8TB22 786 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 CXCL16Q9H2A7 254 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 ASB7Q9H672 318 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 ENTPD7Q9NQZ7 604 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 STXBP5LQ9Y2K9 1186 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 PLXNA4Q9HCM2 1894 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 B4GALT3O60512 393 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 EXOC3O60645 756 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 PPP1R2P41236 205 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 TMEM132DQ14C87 1099 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 SURF1Q15526 300 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 ISM2Q6H9L7 571 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 SMYD4Q8IYR2 804 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 BEST2Q8NFU1 509 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 PPM1EQ8WY54 764 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 RABGGTAQ92696 567 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 TCF25Q9BQ70 676 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 KCTD10Q9H3F6 313 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 ADAM28Q9UKQ2 775 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 DERAQ9Y315 318 aa13.12□□□□□ -0.31
CSNK1E-213ENST00000495232 BIN1O00499 593 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 B3GAT3O94766 335 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 MBD3O95983 291 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 ADRB2P07550 413 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 CYP3A5P20815 502 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 DNAJB1P25685 340 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 CLCNKBP51801 687 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 NAB2Q15742 525 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 SNRNP35Q16560 246 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 UPP1Q16831 310 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 KIAA1841Q6NSI8 718 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 TSG101Q99816 390 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 CLSTN2Q9H4D0 955 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 GOLGA2P5Q9HBQ8 144 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 CACNG4Q9UBN1 327 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 FRMD4BQ9Y2L6 1034 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 R3HCC1Q9Y3T6 440 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 C2CD2Q9Y426 696 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSNK1E-213ENST00000495232 PODXLO00592 558 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 PSMA7O14818 248 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 MEFVO15553 781 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 KIF4AO95239 1232 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 NR3C1P04150 777 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 PRCPP42785 496 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 TFAMQ00059 246 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 MYBPC2Q14324 1141 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 PLPP4Q5VZY2 271 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 TRIML1Q8N9V2 468 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 HASPINQ8TF76 798 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 MARCH5Q9NX47 278 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 SSX2IPQ9Y2D8 614 aa13.1□□□□□ -0.31
CSNK1E-213ENST00000495232 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms