RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 APOL6Q9BWW8 343 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 LRRCC1Q9C099 1032 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 AGO4Q9HCK5 861 aaKnown RBP10.03□□□□□ -0.8
GARNL3-219ENST00000495172 FBRSL1Q9HCM7 1045 aaKnown RBP10.03□□□□□ -0.8
GARNL3-219ENST00000495172 ZSWIM5Q9P217 1185 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 LRBAP50851 2863 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 ITPR2Q14571 2701 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 PCDH15Q96QU1 1955 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 MYO16Q9Y6X6 1858 aa10.02□□□□□ -0.8
GARNL3-219ENST00000495172 PTPRDP23468 1912 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 A0A0D9SFI3 127 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 ARL5CA6NH57 179 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 B8ZZF3 427 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 EGFP01133 1207 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 SLC26A2P50443 739 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 FAM171A1Q5VUB5 890 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 CATSPER4Q7RTX7 472 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 MRPL10Q7Z7H8 261 aaKnown RBP10.02□□□□□ -0.81
GARNL3-219ENST00000495172 MFSD6LQ8IWD5 586 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 DEFB119Q8N690 84 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 RLN3Q8WXF3 142 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 CUL5Q93034 780 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 PGBD4Q96DM1 585 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 CHFRQ96EP1 664 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 MXRA8Q9BRK3 442 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
GARNL3-219ENST00000495172 POLMQ9NP87 494 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-219ENST00000495172 DKK4Q9UBT3 224 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 STK24Q9Y6E0 443 aa10.02□□□□□ -0.81
GARNL3-219ENST00000495172 USP9YO00507 2555 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-219ENST00000495172 hCG_1642624A0A1W2PR95 340 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 UPK3BL1B0FP48 263 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 UPK3BL2E5RIL1 263 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 KIF5BP33176 963 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 CLDN6P56747 220 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 LMAN2Q12907 356 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 TEAD2Q15562 447 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 TAF1BQ53T94 588 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 TOGARAM2Q6ZUX3 1019 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 PRICKLE2Q7Z3G6 844 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 YAF2Q8IY57 180 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 MINDY1Q8N5J2 469 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 SPRYD3Q8NCJ5 442 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 LSM14AQ8ND56 463 aaKnown RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 EIF2AQ9BY44 585 aaKnown RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 GCOM2Q9BZD3 368 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 C8orf33Q9H7E9 229 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 NXF1Q9UBU9 619 aaKnown RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 EVLQ9UI08 416 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-219ENST00000495172 PAXBP1Q9Y5B6 917 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 NFASCO94856 1347 aa10.01□□□□□ -0.81
GARNL3-219ENST00000495172 TADA2AO75478 443 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 C1RP00736 705 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 SKIP12755 728 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 MYL4P12829 197 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 PTPN2P17706 415 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 ITPKAP23677 461 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 RAB27AP51159 221 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 TTC30AQ86WT1 665 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 RALGPS2Q86X27 583 aaPredicted RBP10□□□□□ -0.81
GARNL3-219ENST00000495172 IQCA1Q86XH1 822 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 RPLP0P6Q8NHW5 317 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 PI4K2BQ8TCG2 481 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 DEPDC1BQ8WUY9 529 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 COLEC11Q9BWP8 271 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 MINDY3Q9H8M7 445 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 LY9Q9HBG7 655 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 KLK14Q9P0G3 267 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 KANSL3Q9P2N6 904 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 ANKMY1Q9P2S6 941 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 GABBR1Q9UBS5 961 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 PCDHA6Q9UN73 950 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 PCDHA8Q9Y5H6 950 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 KIAA1549LQ6ZVL6 1849 aa10□□□□□ -0.81
GARNL3-219ENST00000495172 AHCTF1Q8WYP5 2266 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 OTOL1A6NHN0 477 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 MAGEB2O15479 319 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 DHX15O43143 795 aaKnown RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 OPHN1O60890 802 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 KIF4AO95239 1232 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 SFPQP23246 707 aaKnown RBP eCLIP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 TMOD1P28289 359 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 CSRP3P50461 194 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 ATXN3P54252 364 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 CXADRP78310 365 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 KARSQ15046 597 aaKnown RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 UGCGQ16739 394 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 IFIT1BQ5T764 474 aaKnown RBP9.99□□□□□ -0.81
GARNL3-219ENST00000495172 ANO7Q6IWH7 933 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 TMPRSS7Q7RTY8 843 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 GPR155Q7Z3F1 870 aa9.99□□□□□ -0.81
GARNL3-219ENST00000495172 CAMKK1Q8N5S9 505 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms