RNA–Protein interactions for RNA: ENST00000494568.5

PLSCR1-219, Transcript of phospholipid scramblase 1, humanhuman

TSL 2

Gene PLSCR1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-219ENST00000494568 XKR4Q5GH76 650 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 ALKAL1Q6UXT8 129 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 TAS1R3Q7RTX0 852 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 DDX27Q96GQ7 796 aaKnown RBP13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 PLIN2Q99541 437 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 NTPCRQ9BSD7 190 aaKnown RBP13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 GOLGA2P5Q9HBQ8 144 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 SLC38A7Q9NVC3 462 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 POLIQ9UNA4 740 aa13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 TDRD15B5MCY1 1934 aaKnown RBP13.48□□□□□ -0.25
PLSCR1-219ENST00000494568 VWA3AA6NCI4 1184 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 I3L4J1 428 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 CCL16O15467 120 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 XYLBO75191 536 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 HARSP12081 509 aaKnown RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 PLS3P13797 630 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 HOXA9P31269 272 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 SMTNP53814 917 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 NTHL1P78549 312 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 HYIQ5T013 277 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 AXDND1Q5T1B0 1012 aaPredicted RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 MPZL3Q6UWV2 235 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 CD300LGQ6UXG3 332 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 ANKS3Q6ZW76 656 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 SYT2Q8N9I0 419 aaPredicted RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 SPIRE2Q8WWL2 714 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 BACE2Q9Y5Z0 518 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 CDY1Q9Y6F8 540 aa13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 ZFP37Q9Y6Q3 630 aaPredicted RBP13.47□□□□□ -0.25
PLSCR1-219ENST00000494568 RIF1Q5UIP0 2472 aaKnown RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 ANHXE9PGG2 379 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 PODXLO00592 558 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 PI15O43692 258 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 PLA2G4BP0C869 781 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 SRFP11831 508 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 KCNE1P15382 129 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 AOC1P19801 751 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 PROZP22891 400 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 BRCC3P46736 316 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 MCM2P49736 904 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 SOX4Q06945 474 aaPredicted RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 RSPO2Q6UXX9 243 aaPredicted RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 C3orf58Q8NDZ4 430 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 ST13P5Q8NFI4 369 aaPredicted RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 SNX27Q96L92 541 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 CDH7Q9ULB5 785 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 SMC3Q9UQE7 1217 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.25
PLSCR1-219ENST00000494568 MYO15AQ9UKN7 3530 aa13.46□□□□□ -0.26
PLSCR1-219ENST00000494568 KRBA1A5PL33 1030 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 ABLIM1O14639 778 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 GFRA3O60609 400 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 TOM1L1O75674 476 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 RFX1P22670 979 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 HTR4Q13639 388 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 LARP1BQ659C4 914 aaKnown RBP13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 RTL10Q7L3V2 364 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 TMEM161BQ8NDZ6 487 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 GPR152Q8TDT2 470 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 FGF13Q92913 245 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 KCND2Q9NZV8 630 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 CNTN3Q9P232 1028 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 ANKFY1Q9P2R3 1169 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 CA14Q9ULX7 337 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 NUB1Q9Y5A7 615 aa13.45□□□□□ -0.26
PLSCR1-219ENST00000494568 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 C2orf16Q68DN1 1984 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 NPHP3-ACAD11A0A0J9YXS1 232 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 SYN3O14994 580 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 CLDN3O15551 220 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 POU2F2P09086 479 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 MAPTP10636 758 aaKnown RBP13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 ELF1P32519 619 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 TMEM119Q4V9L6 283 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 SEZ6Q53EL9 994 aa13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
PLSCR1-219ENST00000494568 PARM1Q6UWI2 310 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms