RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C11orf16Q9NQ32 467 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 CNTN3Q9P232 1028 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 ANKFY1Q9P2R3 1169 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 DPP7Q9UHL4 492 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 MTCL1Q9Y4B5 1905 aaKnown RBP14.41□□□□□ -0.1
ERCC3-209ENST00000494464 SMIM28A0A1B0GU29 152 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 CLDN3O15551 220 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 GLUD1P00367 558 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 MRE11P49959 708 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 OSTNP61366 133 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 TMEM31Q5JXX7 168 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 RTP2Q5QGT7 225 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 RARS2Q5T160 578 aaKnown RBP14.41□□□□□ -0.1
ERCC3-209ENST00000494464 C15orf39Q6ZRI6 1047 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 MAP4K3Q8IVH8 894 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 MYCT1Q8N699 235 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 LINC00301Q8NCQ3 95 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 CMASQ8NFW8 434 aaPredicted RBP14.41□□□□□ -0.1
ERCC3-209ENST00000494464 HASPINQ8TF76 798 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 HDAC7Q8WUI4 952 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 RIN2Q8WYP3 895 aaPredicted RBP14.41□□□□□ -0.1
ERCC3-209ENST00000494464 PIK3R5Q8WYR1 880 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 BICD1Q96G01 975 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 ZBTB45Q96K62 511 aaPredicted RBP14.41□□□□□ -0.1
ERCC3-209ENST00000494464 B3GALT6Q96L58 329 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 SPATA32Q96LK8 384 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 RHOBTB2Q9BYZ6 727 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 ST6GALNAC4Q9H4F1 302 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 POMKQ9H5K3 350 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 CDH22Q9UJ99 828 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 TBX20Q9UMR3 447 aa14.41□□□□□ -0.1
ERCC3-209ENST00000494464 HNRNPDLO14979 420 aaKnown RBP14.4□□□□□ -0.1
ERCC3-209ENST00000494464 PPP6R2O75170 966 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 PAPLNO95428 1278 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 YEATS4O95619 227 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 HARSP12081 509 aaKnown RBP14.4□□□□□ -0.1
ERCC3-209ENST00000494464 LIG4P49917 911 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 CLCNKBP51801 687 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 GTF2BQ00403 316 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 STK38Q15208 465 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 UPP1Q16831 310 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 CCDC183Q5T5S1 534 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 FAM171A1Q5VUB5 890 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 RRAGBQ5VZM2 374 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 PDXDC1Q6P996 788 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.4□□□□□ -0.1
ERCC3-209ENST00000494464 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 GPR149Q86SP6 731 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 C12orf76Q8N812 135 aaPredicted RBP14.4□□□□□ -0.1
ERCC3-209ENST00000494464 RPGRIP1Q96KN7 1286 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 ZMAT2Q96NC0 199 aaKnown RBP14.4□□□□□ -0.1
ERCC3-209ENST00000494464 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 HAPLN2Q9GZV7 340 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 MAN1C1Q9NR34 630 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 MUTYHQ9UIF7 546 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 NR2E1Q9Y466 385 aa14.4□□□□□ -0.1
ERCC3-209ENST00000494464 MEFVO15553 781 aaPredicted RBP14.39□□□□□ -0.11
ERCC3-209ENST00000494464 LETM1O95202 739 aaPredicted RBP14.39□□□□□ -0.11
ERCC3-209ENST00000494464 SOX4Q06945 474 aaPredicted RBP14.39□□□□□ -0.11
ERCC3-209ENST00000494464 KYAT1Q16773 422 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 ATAT1Q5SQI0 421 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 DCLRE1AQ6PJP8 1040 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 CYP26C1Q6V0L0 522 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 C3orf58Q8NDZ4 430 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
ERCC3-209ENST00000494464 LRFN3Q9BTN0 628 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 ZHX3Q9H4I2 956 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 PLEKHA4Q9H4M7 779 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 GOLGA2P5Q9HBQ8 144 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 SEL1LQ9UBV2 794 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
ERCC3-209ENST00000494464 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.39□□□□□ -0.11
ERCC3-209ENST00000494464 A0A087X0B3 334 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 PRR33A8MZF0 331 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 SPTLC2O15270 562 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 FAM189A1O60320 539 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 B3GAT3O94766 335 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 CLTAP09496 248 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 FGFR3P22607 806 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 STAT6P42226 847 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 PSMD5Q16401 504 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 SLC10A6Q3KNW5 377 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 PRSS55Q6UWB4 352 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-209ENST00000494464 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 TMC5Q6UXY8 1006 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 SV2BQ7L1I2 683 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 LNX1Q8TBB1 728 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-209ENST00000494464 DDX12PQ92771 950 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
ERCC3-209ENST00000494464 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 MYMKA6NI61 221 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 PODXLO00592 558 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 OGTO15294 1046 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 TGM5O43548 720 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 PPP1R37O75864 691 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms