RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 C18orf25Q96B23 403 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 ZNF707Q96C28 371 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 EPSTI1Q96J88 318 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 CDK5RAP3Q96JB5 506 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 CLIC6Q96NY7 704 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 REEP2Q9BRK0 252 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 TCHPQ9BT92 498 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 TTPALQ9BTX7 342 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 NT5C3AQ9H0P0 336 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 C17orf75Q9HAS0 396 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 FNIP2Q9P278 1114 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 NR2E1Q9Y466 385 aa9.36□□□□□ -0.91
LRCH3-219ENST00000494069 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
LRCH3-219ENST00000494069 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 MCF2P10911 925 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 TKTP29401 623 aaKnown RBP9.35□□□□□ -0.91
LRCH3-219ENST00000494069 SPAG1Q07617 926 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 SIGLEC14Q08ET2 396 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 PSMD5Q16401 504 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 UPP1Q16831 310 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 SLC10A6Q3KNW5 377 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 ZBTB41Q5SVQ8 909 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 MPZL3Q6UWV2 235 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 BRAPQ7Z569 592 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 ZDHHC14Q8IZN3 488 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 HS6ST3Q8IZP7 471 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 SMG7Q92540 1137 aaKnown RBP9.35□□□□□ -0.91
LRCH3-219ENST00000494069 RAD54LQ92698 747 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 FAM122AQ96E09 287 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 SNX27Q96L92 541 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 AK8Q96MA6 479 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 TIPINQ9BVW5 301 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 CCDC94Q9BW85 323 aaPredicted RBP9.35□□□□□ -0.91
LRCH3-219ENST00000494069 IKZF4Q9H2S9 585 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.35□□□□□ -0.91
LRCH3-219ENST00000494069 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 MTMR6Q9Y217 621 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 C2orf16Q68DN1 1984 aa9.35□□□□□ -0.91
LRCH3-219ENST00000494069 TMEM189-UBE2V1I3L0A0 370 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 PPP1R37O75864 691 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 KCNE1P15382 129 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 FGFR3P22607 806 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 LONP1P36776 959 aaKnown RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 TNFSF9P41273 254 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 SMTNP53814 917 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 YARSP54577 528 aaKnown RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 VCPP55072 806 aaKnown RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 NCKAP1LP55160 1127 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 NTHL1P78549 312 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 STRN3Q13033 797 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 DCLRE1AQ6PJP8 1040 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 C15orf39Q6ZRI6 1047 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 CCDC149Q6ZUS6 474 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 HAUS6Q7Z4H7 955 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 APBB1IPQ7Z5R6 666 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 CMASQ8NFW8 434 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 RSAD2Q8WXG1 361 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 CALML4Q96GE6 196 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 MFSD14AQ96MC6 490 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 ACAP3Q96P50 834 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 USP28Q96RU2 1077 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 MYADMQ96S97 322 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 FIZ1Q96SL8 496 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 ZHX3Q9H4I2 956 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 WDR6Q9NNW5 1121 aaKnown RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 FBXO2Q9UK22 296 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-219ENST00000494069 SORCS3Q9UPU3 1222 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 VWA8A3KMH1 1905 aa9.34□□□□□ -0.91
LRCH3-219ENST00000494069 ZNF318Q5VUA4 2279 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 DOCK6Q96HP0 2047 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 TISP43B9A030 160 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 K7ELQ4 463 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-219ENST00000494069 PODXLO00592 558 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 CLDN3O15551 220 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 TOM1L1O75674 476 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 ZMYND10O75800 440 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 FAM13AO94988 1023 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 BMP15O95972 392 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 CXCL8P10145 99 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 PDCP20941 246 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 NMT1P30419 496 aaKnown RBP9.33□□□□□ -0.92
LRCH3-219ENST00000494069 OR1D2P34982 312 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 GUCY2FP51841 1108 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 ZNF131P52739 623 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 MCL1Q07820 350 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 MTMR3Q13615 1198 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
LRCH3-219ENST00000494069 ZC2HC1CQ53FD0 456 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-219ENST00000494069 SLC39A4Q6P5W5 647 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 ZPBP2Q6X784 338 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-219ENST00000494069 OTOP3Q7RTS5 596 aa9.33□□□□□ -0.92
LRCH3-219ENST00000494069 GPR65Q8IYL9 337 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms