RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 IGBP1P78318 339 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 CUL2Q13617 745 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 AMHR2Q16671 573 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 DUSP28Q4G0W2 176 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 BEND6Q5SZJ8 279 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-208ENST00000494028 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 CST9Q5W186 159 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 TSHZ1Q6ZSZ6 1077 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 PEX26Q7Z412 305 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 EFCAB13Q8IY85 973 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 SYCE1Q8N0S2 351 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 OR6J1Q8NGC5 347 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 SLC35G2Q8TBE7 412 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 TAF4BQ92750 862 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 HES6Q96HZ4 224 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 TINF2Q9BSI4 451 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 MTMR12Q9C0I1 747 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 MINDY3Q9H8M7 445 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 PTPRHQ9HD43 1115 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 ARFGAP3Q9NP61 516 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 OGFRQ9NZT2 677 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 RNF14Q9UBS8 474 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 CPA4Q9UI42 421 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 NOC2LQ9Y3T9 749 aaKnown RBP11.45□□□□□ -0.58
CLCN6-208ENST00000494028 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 INO80B-WBP1J3KQ70 363 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 KCNK3O14649 394 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 MAGEB2O15479 319 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 DDX3YO15523 660 aaKnown RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 ATP8B1O43520 1251 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 ERLIN1O75477 346 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 CALCAP01258 141 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 GZMAP12544 262 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 KRT5P13647 590 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 AP3M2P53677 418 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 HUNKP57058 714 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 IRF5Q13568 498 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 ACVR2BQ13705 512 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 NCOA4Q13772 614 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 FAM187BQ17R55 369 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 CLEC16AQ2KHT3 1053 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 WDR44Q5JSH3 913 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 MORN1Q5T089 497 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 DAAM2Q86T65 1068 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 DPP9Q86TI2 863 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 GSPT2Q8IYD1 628 aaKnown RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 KRT222Q8N1A0 295 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 MSL3Q8N5Y2 521 aaKnown RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 METTL13Q8N6R0 699 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 CEP120Q8N960 986 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF653Q96CK0 615 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 PBKQ96KB5 322 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 FUT8Q9BYC5 575 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 ABHD16BQ9H3Z7 469 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 ZCCHC17Q9NP64 241 aaKnown RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 PRMT7Q9NVM4 692 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-208ENST00000494028 GTF3C4Q9UKN8 822 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 TNFSF13BQ9Y275 285 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 NUB1Q9Y5A7 615 aa11.44□□□□□ -0.58
CLCN6-208ENST00000494028 PGRMC1O00264 195 aaKnown RBP11.43□□□□□ -0.58
CLCN6-208ENST00000494028 ASAP2O43150 1006 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 ASS1P00966 412 aaKnown RBP11.43□□□□□ -0.58
CLCN6-208ENST00000494028 FTLP02792 175 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-208ENST00000494028 CYP1A2P05177 515 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 IQCF3P0C7M6 154 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 TBXAS1P24557 533 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-208ENST00000494028 TNFRSF8P28908 595 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF132P52740 706 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 POU5F1BQ06416 359 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 PPFIA1Q13136 1202 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 GRIK4Q16099 956 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 DCAF12L1Q5VU92 463 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 SCARA3Q6AZY7 606 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 C8orf74Q6P047 294 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 RASGEF1CQ8N431 466 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 RBBP8NLQ8NC74 664 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-208ENST00000494028 CALR3Q96L12 384 aaKnown RBP11.43□□□□□ -0.58
CLCN6-208ENST00000494028 PDZD7Q9H5P4 517 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 IFT122Q9HBG6 1241 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 AMFRQ9UKV5 643 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 CNTN6Q9UQ52 1028 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 TRIP11Q15643 1979 aa11.43□□□□□ -0.58
CLCN6-208ENST00000494028 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 A0A087WZ62 844 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 MANSC4A6NHS7 340 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 MAP2K7O14733 419 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 MEFVO15553 781 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 B4GALT4O60513 344 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 TOMM70O94826 608 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 F2P00734 622 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 VTNP04004 478 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms