RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MXI1P50539 228 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 SCNN1GP51170 649 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 SURF1Q15526 300 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 FKBP15Q5T1M5 1219 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 C16orf59Q7L2K0 433 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 TMCO2Q7Z6W1 182 aaPredicted RBP20.97■□□□□ 0.95
USP39-218ENST00000493829 HELQQ8TDG4 1101 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 LBHD1Q9BQE6 289 aaPredicted RBP20.97■□□□□ 0.95
USP39-218ENST00000493829 TMEM117Q9H0C3 514 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 CNTN3Q9P232 1028 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 TUBGCP4Q9UGJ1 667 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 PLAGL2Q9UPG8 496 aa20.97■□□□□ 0.95
USP39-218ENST00000493829 ARL5CA6NH57 179 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 LRRC10BA6NIK2 292 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 ZBBXA8MT70 800 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 CLSTN1O94985 981 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 GATMP50440 423 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 TDRD10Q5VZ19 366 aaKnown RBP20.96■□□□□ 0.95
USP39-218ENST00000493829 C18orf25Q96B23 403 aaPredicted RBP20.96■□□□□ 0.95
USP39-218ENST00000493829 ASB7Q9H672 318 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 PLEKHA5Q9HAU0 1116 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 TMEM161AQ9NX61 479 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 PCDHB7Q9Y5E2 793 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 PTGESO14684 152 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 STX10O60499 249 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 POMCP01189 267 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 ACTN1P12814 892 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 KLK7P49862 253 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 FAM189BP81408 668 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 DEFB103AP81534 67 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 CLLU1OSQ5K130 101 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 SCARA3Q6AZY7 606 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 ALKAL1Q6UXT8 129 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 ZNF365Q70YC5 407 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 ELMO3Q96BJ8 720 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 ANKRD36BP1Q96IX9 119 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 TMEM8AQ9HCN3 771 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 GIT1Q9Y2X7 761 aa20.96■□□□□ 0.95
USP39-218ENST00000493829 SMIM28A0A1B0GU29 152 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 ABHD14A-ACY1A0A1B0GW23 586 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 PHACTR2O75167 634 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 TNNC2P02585 160 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 TPM3P06753 285 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 WDR5P61964 334 aaKnown RBP20.95■□□□□ 0.94
USP39-218ENST00000493829 CLDN10P78369 228 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 NR1I3Q14994 352 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 FAM117BQ6P1L5 589 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 SV2AQ7L0J3 742 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 CD302Q8IX05 232 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 PCMTD1Q96MG8 357 aaPredicted RBP20.95■□□□□ 0.94
USP39-218ENST00000493829 GOLGA2P5Q9HBQ8 144 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 GCNT4Q9P109 453 aa20.95■□□□□ 0.94
USP39-218ENST00000493829 LRRN2O75325 713 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 EOMESO95936 686 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 PIK3CAP42336 1068 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 POU5F1Q01860 360 aaKnown RBP20.94■□□□□ 0.94
USP39-218ENST00000493829 SYCP1Q15431 976 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 DUOXA2Q1HG44 320 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 KRT39Q6A163 491 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 GLB1LQ6UWU2 654 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 TAS1R2Q8TE23 839 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.94■□□□□ 0.943e-12■■□□□ 13.5
USP39-218ENST00000493829 MIOSQ9NXC5 875 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 CACNG4Q9UBN1 327 aa20.94■□□□□ 0.94
USP39-218ENST00000493829 OFD1O75665 1012 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 CAPN15O75808 1086 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 FGBP02675 491 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 AMHP03971 560 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 KRT19P08727 400 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 GTF2H1P32780 548 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 KCNJ6P48051 423 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 APBA1Q02410 837 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 ENPEPQ07075 957 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 NPAS4Q8IUM7 802 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 ABI1Q8IZP0 508 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 GSTCDQ8NEC7 633 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 UBN1Q9NPG3 1134 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 C2CD2Q9Y426 696 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 NR2E3Q9Y5X4 410 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 N4BP1O75113 896 aaKnown RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 C4BPAP04003 597 aaKnown RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 ITGB3P05106 788 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 KCNE1P15382 129 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 SOX4Q06945 474 aaPredicted RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 ZACNQ401N2 412 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 PAN2Q504Q3 1202 aaKnown RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 XKR4Q5GH76 650 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 PSRC1Q6PGN9 363 aaPredicted RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 TRAPPC11Q7Z392 1133 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 C1orf127Q8N9H9 656 aa20.93■□□□□ 0.94
USP39-218ENST00000493829 LSM14BQ9BX40 385 aaKnown RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 ELAC1Q9H777 363 aaKnown RBP20.93■□□□□ 0.94
USP39-218ENST00000493829 PTPRSQ13332 1948 aa20.92■□□□□ 0.94
USP39-218ENST00000493829 TDRD15B5MCY1 1934 aaKnown RBP20.92■□□□□ 0.94
USP39-218ENST00000493829 BAIAP3O94812 1187 aa20.92■□□□□ 0.94
USP39-218ENST00000493829 VNN1O95497 513 aa20.92■□□□□ 0.94
USP39-218ENST00000493829 TMEM240Q5SV17 173 aa20.92■□□□□ 0.94
USP39-218ENST00000493829 GBP6Q6ZN66 633 aa20.92■□□□□ 0.94
USP39-218ENST00000493829 C15orf39Q6ZRI6 1047 aa20.92■□□□□ 0.94
USP39-218ENST00000493829 URGCPQ8TCY9 931 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms