RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ANKEF1Q9NU02 776 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 BLOC1S4Q9NUP1 217 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 HRH3Q9Y5N1 445 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 C9IYK1 514 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 MEN1O00255 615 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 RNF144AP50876 292 aaPredicted RBP13.37□□□□□ -0.27
UPF3A-210ENST00000493727 ZXDAP98168 799 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 POSTNQ15063 836 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 KIZQ2M2Z5 673 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 MTERF2Q49AM1 385 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
UPF3A-210ENST00000493727 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 POF1BQ8WVV4 589 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM40Q8WWA1 233 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 STAMQ92783 540 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 CEP170P1Q96L14 293 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 OSMRQ99650 979 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 ATP6V0A4Q9HBG4 840 aa13.37□□□□□ -0.27
UPF3A-210ENST00000493727 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM150BA6NC51 233 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 TBKBP1A7MCY6 615 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 ZBTB39O15060 712 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 MGEA5O60502 916 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
UPF3A-210ENST00000493727 GPR32O75388 356 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 VTNP04004 478 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
UPF3A-210ENST00000493727 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
UPF3A-210ENST00000493727 LAG3P18627 525 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 GPC1P35052 558 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 ASIC1P78348 528 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 FAM189BP81408 668 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 PNOCQ13519 176 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 EFCAB12Q6NXP0 572 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
UPF3A-210ENST00000493727 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 PRRX2Q99811 253 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 BLZF1Q9H2G9 400 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
UPF3A-210ENST00000493727 AKT3Q9Y243 479 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 USP15Q9Y4E8 981 aaPredicted RBP13.36□□□□□ -0.27
UPF3A-210ENST00000493727 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 MYO10Q9HD67 2058 aa13.36□□□□□ -0.27
UPF3A-210ENST00000493727 MAN1A2O60476 641 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 SMC2O95347 1197 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
UPF3A-210ENST00000493727 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
UPF3A-210ENST00000493727 NRIP1P48552 1158 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 RARRES1P49788 294 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 GATMP50440 423 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 CLCN3P51790 818 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 NPEPPSP55786 919 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 NLRP11P59045 1033 aaKnown RBP13.35□□□□□ -0.27
UPF3A-210ENST00000493727 ANO5Q75V66 913 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 FBXL6Q8N531 539 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 SUSD6Q92537 303 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 CCDC47Q96A33 483 aaKnown RBP13.35□□□□□ -0.27
UPF3A-210ENST00000493727 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 SH2D3AQ9BRG2 576 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM117Q9H0C3 514 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
UPF3A-210ENST00000493727 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 TLR9Q9NR96 1032 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 PCDHGC5Q9Y5F6 944 aa13.35□□□□□ -0.27
UPF3A-210ENST00000493727 GVINP1Q7Z2Y8 2422 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM229AB2RXF0 380 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 TBCAO75347 108 aaKnown RBP13.34□□□□□ -0.27
UPF3A-210ENST00000493727 FGF18O76093 207 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-210ENST00000493727 MYL1P05976 194 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 CASP1P29466 404 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 POLGP54098 1239 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-210ENST00000493727 SIGLEC14Q08ET2 396 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 RAD51AP2Q09MP3 1159 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 CUL4BQ13620 913 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 DSC3Q14574 896 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 DYMQ7RTS9 669 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 SUGP1Q8IWZ8 645 aaKnown RBP13.34□□□□□ -0.27
UPF3A-210ENST00000493727 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
UPF3A-210ENST00000493727 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 THNSL1Q8IYQ7 743 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 ABI1Q8IZP0 508 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 LINC01465Q8N7H1 131 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 VN1R2Q8NFZ6 395 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 MICAL1Q8TDZ2 1067 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
UPF3A-210ENST00000493727 SCLT1Q96NL6 688 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms