RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 PIGRP01833 764 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 RARBP10826 455 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 GNAT1P11488 350 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 HSPA6P17066 643 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 NR2F2P24468 414 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 CST5P28325 142 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 MTIF2P46199 727 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 PSEN2P49810 448 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 EFNA5P52803 228 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 CAP1Q01518 475 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 CACNB2Q08289 660 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ADAM9Q13443 819 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 RNF168Q8IYW5 571 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 KIRREL3Q8IZU9 778 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 DEPTORQ8TB45 409 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 RAET1EQ8TD07 263 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM143Q96AN5 459 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 SCLT1Q96NL6 688 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 TUBGCP2Q9BSJ2 902 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 NFKBIZQ9BYH8 718 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 CENPHQ9H3R5 247 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 EBF2Q9HAK2 575 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ABCB6Q9NP58 842 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 AGPAT3Q9NRZ7 376 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 INTS13Q9NVM9 706 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ATP8A1Q9Y2Q0 1164 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 NRCAMQ92823 1304 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 A0A1W2PQC6 194 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 A6NHS1 94 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 N4BP3O15049 544 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MSCO60682 206 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 LUC7L3O95232 432 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 EPB41P11171 864 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 SFPQP23246 707 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 TMOD1P28289 359 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PBX1P40424 430 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PSMC1P62191 440 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CDC42EP1Q00587 391 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ENPEPQ07075 957 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CAPSQ13938 189 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MFSD10Q14728 455 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MYBPC3Q14896 1274 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 GRIK4Q16099 956 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PUS10Q3MIT2 529 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CCDC92Q53HC0 331 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 HSP90AA4PQ58FG1 418 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 EFCAB12Q6NXP0 572 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CYB5D1Q6P9G0 228 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 SRGAP1Q7Z6B7 1085 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 FAM228AQ86W67 206 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 IFNLR1Q8IU57 520 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ZBTB8OSQ8IWT0 167 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CCDC13Q8IYE1 715 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CCHCR1Q8TD31 782 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ZNF296Q8WUU4 475 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 LZICQ8WZA0 190 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 IQCDQ96DY2 449 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 BEGAINQ9BUH8 593 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 CAPS2Q9BXY5 557 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ANKZF1Q9H8Y5 726 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 TAB2Q9NYJ8 693 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 SUCLA2Q9P2R7 463 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 TPX2Q9ULW0 747 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 BARX2Q9UMQ3 279 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ZNF510Q9Y2H8 683 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 GMEB1Q9Y692 573 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ADGRA3Q8IWK6 1321 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 SYF2O95926 243 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 RPSAP08865 295 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 HARSP12081 509 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PRKAR2AP13861 404 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 DESP17661 470 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 GARTP22102 1010 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 KLRC1P26715 233 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 HOXC8P31273 242 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PSMC2P35998 433 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MAGEA10P43363 369 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 TRPC1P48995 793 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 SOX10P56693 466 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MCCD1P59942 119 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 HTRA3P83110 453 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PURAQ00577 322 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 KCNA1Q09470 495 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 LAMTOR4Q0VGL1 99 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 STRN3Q13033 797 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MKRN4PQ13434 485 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 TRIM14Q14142 442 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 VWA3BQ502W6 1294 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 C16orf87Q6PH81 154 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 TRIM59Q8IWR1 403 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 SMYD1Q8NB12 490 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PRPF31Q8WWY3 499 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 RUFY1Q96T51 708 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MTG1Q9BT17 334 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 NOC4LQ9BVI4 516 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 ZWILCHQ9H900 591 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 PHF24Q9UPV7 400 aa7.77□□□□□ -1.17
SMARCE1-211ENST00000493660 MBLAC1A4D2B0 266 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1-211ENST00000493660 LRRIQ4A6NIV6 560 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms