RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 GRASPQ7Z6J2 395 aaPredicted RBP18.23■□□□□ 0.51
PTPRU-208ENST00000493601 SLC7A14Q8TBB6 771 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 PTPRHQ9HD43 1115 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 MTRRQ9UBK8 725 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
PTPRU-208ENST00000493601 MYH15Q9Y2K3 1946 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 CCL16O15467 120 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 ADAM12O43184 909 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 MCF2P10911 925 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 GUCY2CP25092 1073 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 CDC25AP30304 524 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 OR1D2P34982 312 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 ATP2C1P98194 919 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-208ENST00000493601 MAPK7Q13164 816 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-208ENST00000493601 MPZL3Q6UWV2 235 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 ANKS3Q6ZW76 656 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 RTL10Q7L3V2 364 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 TAS1R3Q7RTX0 852 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 CCDC105Q8IYK2 499 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 KCTD17Q8N5Z5 321 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 CEP120Q8N960 986 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 DDX27Q96GQ7 796 aaKnown RBP18.22■□□□□ 0.51
PTPRU-208ENST00000493601 MMTAG2Q9BU76 263 aaKnown RBP18.22■□□□□ 0.51
PTPRU-208ENST00000493601 GOLGA2P5Q9HBQ8 144 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 KCNG1Q9UIX4 513 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 CDH7Q9ULB5 785 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 DOCK6Q96HP0 2047 aa18.22■□□□□ 0.51
PTPRU-208ENST00000493601 SLC16A4O15374 487 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 PROZP22891 400 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 TKTP29401 623 aaKnown RBP18.21■□□□□ 0.51
PTPRU-208ENST00000493601 NBL1P41271 181 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 OSTNP61366 133 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 STRN3Q13033 797 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 ZRSR1Q15695 479 aaKnown RBP18.21■□□□□ 0.51
PTPRU-208ENST00000493601 UVSSAQ2YD98 709 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 XKR4Q5GH76 650 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 HYIQ5T013 277 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 KCNK18Q7Z418 384 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 C3orf58Q8NDZ4 430 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 CDK5RAP3Q96JB5 506 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 SNX27Q96L92 541 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 ACAP3Q96P50 834 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 TARS2Q9BW92 718 aaKnown RBP18.21■□□□□ 0.51
PTPRU-208ENST00000493601 CA14Q9ULX7 337 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 POLIQ9UNA4 740 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 BACE2Q9Y5Z0 518 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 CDY1Q9Y6F8 540 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 NUMBLQ9Y6R0 609 aa18.21■□□□□ 0.51
PTPRU-208ENST00000493601 KRBA1A5PL33 1030 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 H3BQV1 296 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 STK25O00506 426 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 PI15O43692 258 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 SMTNP53814 917 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 SOX4Q06945 474 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-208ENST00000493601 MTSS1LQ765P7 747 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 SPIRE2Q8WWL2 714 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 SLC2A4RGQ9NR83 387 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 KCND2Q9NZV8 630 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 CNTN3Q9P232 1028 aa18.2■□□□□ 0.5
PTPRU-208ENST00000493601 VWA3AA6NCI4 1184 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 I3L4J1 428 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 PODXLO00592 558 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 ABLIM1O14639 778 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 TOM1L1O75674 476 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 PLS3P13797 630 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 KCNE1P15382 129 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 IGFBP6P24592 240 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-208ENST00000493601 NTHL1P78549 312 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 NOLC1Q14978 699 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTPRU-208ENST00000493601 ARL6IP4Q66PJ3 421 aaKnown RBP18.19■□□□□ 0.5
PTPRU-208ENST00000493601 CD300LGQ6UXG3 332 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 DTWD2Q8NBA8 298 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 FGF13Q92913 245 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 TMX3Q96JJ7 454 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 NTPCRQ9BSD7 190 aaKnown RBP18.19■□□□□ 0.5
PTPRU-208ENST00000493601 TBC1D17Q9HA65 648 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
PTPRU-208ENST00000493601 ARHGEF3Q9NR81 526 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
PTPRU-208ENST00000493601 SYN3O14994 580 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 HARSP12081 509 aaKnown RBP18.18■□□□□ 0.5
PTPRU-208ENST00000493601 GJB2P29033 226 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
PTPRU-208ENST00000493601 BRCC3P46736 316 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 RAD51AP2Q09MP3 1159 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 ANGPT1Q15389 498 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 PABPC1LQ4VXU2 614 aaKnown RBP18.18■□□□□ 0.5
PTPRU-208ENST00000493601 SYT2Q8N9I0 419 aaPredicted RBP18.18■□□□□ 0.5
PTPRU-208ENST00000493601 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 ZMAT2Q96NC0 199 aaKnown RBP18.18■□□□□ 0.5
PTPRU-208ENST00000493601 KCNH3Q9ULD8 1083 aa18.18■□□□□ 0.5
PTPRU-208ENST00000493601 PRR23AA6NEV1 266 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 SFI1A8K8P3 1242 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 H0YCG3 227 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 MAPTP10636 758 aaKnown RBP18.17■□□□□ 0.5
PTPRU-208ENST00000493601 SLC12A3P55017 1021 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms