RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 HIC2Q96JB3 615 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 WNT8AQ9H1J5 351 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 KIAA1586Q9HCI6 787 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 FBXO6Q9NRD1 293 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-210ENST00000493582 HEY2Q9UBP5 337 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 ACTL7BQ9Y614 415 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 KDM3AQ9Y4C1 1321 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 EXOC1LA0A1B0GW35 172 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 GTPBP10A4D1E9 387 aaKnown RBP12.43□□□□□ -0.42
HDAC4-210ENST00000493582 FAM200BP0CF97 657 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 RRM1P23921 792 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 MAPK6Q16659 721 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 HYIQ5T013 277 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 LCA5Q86VQ0 697 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 FAM186BQ8IYM0 893 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 C12orf65Q9H3J6 166 aaKnown RBP12.43□□□□□ -0.42
HDAC4-210ENST00000493582 ACP6Q9NPH0 428 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 CYLDQ9NQC7 956 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■■■ 198.6
HDAC4-210ENST00000493582 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
HDAC4-210ENST00000493582 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.43□□□□□ -0.42
HDAC4-210ENST00000493582 COL4A1P02462 1669 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 A0A1W2PPM1 405 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 ATF2P15336 505 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 GCAP28676 217 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 PIK3CAP42336 1068 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 MAGEA8P43361 318 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 BPIFB4P59827 614 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 COG2Q14746 738 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 STAT4Q14765 748 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 CFAP157Q5JU67 520 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 NR1H4Q96RI1 486 aaPredicted RBP12.43□□□□□ -0.42
HDAC4-210ENST00000493582 HAPLN3Q96S86 360 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 HERPUD2Q9BSE4 406 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 TRAIPQ9BWF2 469 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 ZNF212Q9UDV6 495 aa12.43□□□□□ -0.42
HDAC4-210ENST00000493582 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
HDAC4-210ENST00000493582 PLSCR1O15162 318 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 TGFB1I1O43294 461 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 ATP6V1G1O75348 118 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 POLD1P28340 1107 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CPA2P48052 419 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 HADHBP55084 474 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 LMNB2Q03252 620 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 GSTA3Q16772 222 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 ACBD5Q5T8D3 534 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 LVRNQ6Q4G3 990 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CATSPER3Q86XQ3 398 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 PTCD3Q96EY7 689 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 SMC6Q96SB8 1091 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CYTH2Q99418 400 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 MXD3Q9BW11 206 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 ALG13Q9NP73 1137 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 ANKRD36CQ5JPF3 1778 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 C2orf71A6NGG8 1288 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 PFDN1O60925 122 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 HAUS5O94927 633 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CETN2P41208 172 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 MAGEA10P43363 369 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 RGS9BPQ6ZS82 235 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 C12orf50Q8NA57 414 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 SLC5A5Q92911 643 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 NSL1Q96IY1 281 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 EYA3Q99504 573 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 TTC1Q99614 292 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 INTS2Q9H0H0 1204 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 BLOC1S6Q9UL45 172 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 TMCO1Q9UM00 188 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 SLC4A7Q9Y6M7 1214 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 ZBED4O75132 1171 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 BAG2O95816 211 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 PENKP01210 267 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 SERPINB3P29508 390 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CDK7P50613 346 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CEP128Q6ZU80 1094 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 DZIP1Q86YF9 867 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 NMD3Q96D46 503 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 FNBP1Q96RU3 617 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 PCDHB18PQ96TA0 734 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 CENPKQ9BS16 269 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 LARSQ9P2J5 1176 aaKnown RBP12.42□□□□□ -0.42
HDAC4-210ENST00000493582 COMMD3-BMI1R4GMX3 469 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 FRMPD4Q14CM0 1322 aa12.42□□□□□ -0.42
HDAC4-210ENST00000493582 DCCP43146 1447 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms