RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 FANCLQ9NW38 375 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 UBQLN1Q9UMX0 589 aaKnown RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 PDE4DIPQ5VU43 2346 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 N4BP1O75113 896 aaKnown RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 TNNC2P02585 160 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 TMEM191BP0C7N4 346 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 DLATP10515 647 aaKnown RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 ZNF18P17022 549 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 SCNN1GP51170 649 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 HTRA4P83105 476 aaPredicted RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 ZBTB6Q15916 424 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 TCP11X2Q5H9J9 407 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 JADE1Q6IE81 842 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 IRF2BP1Q8IU81 584 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 TRIM59Q8IWR1 403 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 GSTCDQ8NEC7 633 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 UROC1Q96N76 676 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 PPP1R10Q96QC0 940 aaKnown RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
LSM2-214ENST00000493387 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
LSM2-214ENST00000493387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
LSM2-214ENST00000493387 CITO14578 2027 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 PTGESO14684 152 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
LSM2-214ENST00000493387 TLL1O43897 1013 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 PAX3P23760 479 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 RPL9P32969 192 aaKnown RBP12.5□□□□□ -0.41
LSM2-214ENST00000493387 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
LSM2-214ENST00000493387 CETN1Q12798 172 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 TUSC3Q13454 348 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 BTG3Q14201 252 aaPredicted RBP12.5□□□□□ -0.41
LSM2-214ENST00000493387 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 TCERG1LQ5VWI1 586 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 FAM117BQ6P1L5 589 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 ZMAT2Q96NC0 199 aaKnown RBP12.5□□□□□ -0.41
LSM2-214ENST00000493387 TMEM175Q9BSA9 504 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 MIOSQ9NXC5 875 aa12.5□□□□□ -0.41
LSM2-214ENST00000493387 LRRC10BA6NIK2 292 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 LRRIQ3A6PVS8 624 aaPredicted RBP12.49□□□□□ -0.41
LSM2-214ENST00000493387 PMM2O15305 246 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 P4HA2O15460 535 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 POMCP01189 267 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 NFICP08651 508 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 LRPAP1P30533 357 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 DSC1Q08554 894 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 RAB30Q15771 203 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 DCAF17Q5H9S7 520 aaPredicted RBP12.49□□□□□ -0.41
LSM2-214ENST00000493387 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 EFCAB13Q8IY85 973 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
LSM2-214ENST00000493387 SLC35C1Q96A29 364 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 TUBGCP2Q9BSJ2 902 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 PRO3102Q9H379 93 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
LSM2-214ENST00000493387 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 AAASQ9NRG9 546 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 LIMA1Q9UHB6 759 aaKnown RBP12.49□□□□□ -0.41
LSM2-214ENST00000493387 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 RWDD3Q9Y3V2 267 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 CEP290O15078 2479 aa12.49□□□□□ -0.41
LSM2-214ENST00000493387 DNAH12Q6ZR08 3092 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 RBAK-RBAKDNI3L0D1 243 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 PHACTR2O75167 634 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 AFPP02771 609 aaKnown RBP12.48□□□□□ -0.41
LSM2-214ENST00000493387 C4BPAP04003 597 aaKnown RBP12.48□□□□□ -0.41
LSM2-214ENST00000493387 ALDH2P05091 517 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 LAG3P18627 525 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 GATMP50440 423 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 AFF1P51825 1210 aaKnown RBP12.48□□□□□ -0.41
LSM2-214ENST00000493387 WNT7BP56706 349 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 DLG4P78352 724 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 RBP5P82980 135 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 KCNH2Q12809 1159 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 BIRC3Q13489 604 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 TRPC3Q13507 836 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 KRT31Q15323 416 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 ZACNQ401N2 412 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms