RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 GOLGA6L22H0YM25 854 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 EXOC5O00471 708 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 LCE2BO14633 110 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 TADA3O75528 432 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 TUSC2O75896 110 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 CHRNA4P43681 627 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ICA1Q05084 483 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 FGL2Q14314 439 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 WDR72Q3MJ13 1102 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PAQR3Q6TCH7 311 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 BTNL9Q6UXG8 535 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 NPNTQ6UXI9 565 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 USP50Q70EL3 339 aaPredicted RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 TICAM2Q86XR7 235 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 FAM43AQ8N2R8 423 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 FLCNQ8NFG4 579 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 KLHDC4Q8TBB5 520 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 MYLIPQ8WY64 445 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PRDM16Q9HAZ2 1276 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 RC3H2Q9HBD1 1191 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 RBM12Q9NTZ6 932 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 LMBRD1Q9NUN5 540 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 KCMF1Q9P0J7 381 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PGAP2Q9UHJ9 254 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ABHD14A-ACY1A0A1B0GW23 586 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 NUDT19A8MXV4 375 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 AKR1B10O60218 316 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ENDOD1O94919 500 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PNLIPP16233 465 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 AOAHP28039 575 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 MGAT5Q09328 741 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 CD163Q86VB7 1156 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 DEPTORQ8TB45 409 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 POF1BQ8WVV4 589 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ATXN2LQ8WWM7 1075 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 GALNT8Q9NY28 637 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 DTLQ9NZJ0 730 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 FTSJ1Q9UET6 329 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 CPA4Q9UI42 421 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 CORO2BQ9UQ03 480 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PTPN22Q9Y2R2 807 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 SIT1Q9Y3P8 196 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PALLDQ8WX93 1383 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ZC3H12DA2A288 527 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 NBNO60934 754 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PHF2O75151 1096 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 CYP7B1O75881 506 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ECHS1P30084 290 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 STARD3Q14849 445 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PLCL1Q15111 1095 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 CNN3Q15417 329 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 DGKDQ16760 1214 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 TMC6Q7Z403 805 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 BRIX1Q8TDN6 353 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 ZNF775Q96BV0 537 aaPredicted RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 SSBP4Q9BWG4 385 aaPredicted RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 ARMT1Q9H993 441 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PCDH18Q9HCL0 1135 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 EPB41L4AQ9HCS5 686 aaPredicted RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 RASA4BC9J798 803 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 ABLIM1O14639 778 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 PHGDHO43175 533 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 RASA4O43374 803 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 H2AFB1P0C5Y9 115 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 H2AFB2P0C5Z0 115 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 USP14P54578 494 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 DBPQ10586 325 aaPredicted RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 ETV3LQ6ZN32 361 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 OTOP2Q7RTS6 562 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 VSIG10LQ86VR7 867 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 LINC01599Q8WXQ3 324 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 UIMC1Q96RL1 719 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 TRMT13Q9NUP7 481 aaKnown RBP3.61□□□□□ -1.83
SNX13-209ENST00000492626 PADI4Q9UM07 663 aa3.61□□□□□ -1.83
SNX13-209ENST00000492626 NFAT5O94916 1531 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 DDX3XO00571 662 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNX13-209ENST00000492626 PRLP01236 227 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 RGS3P49796 1198 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 GALK1P51570 392 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 SEMA5AQ13591 1074 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 ELF2Q15723 593 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 SLC4A8Q2Y0W8 1093 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 CIAPIN1Q6FI81 312 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 RFX8Q6ZV50 586 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 OVCH2Q7RTZ1 564 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 FAM129CQ86XR2 697 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 C3orf20Q8ND61 904 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 RXFP1Q9HBX9 757 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 RNF181Q9P0P0 153 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 ARHGAP20Q9P2F6 1191 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 RTL1A6NKG5 1358 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 FSBPO95073 299 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 COL1A1P02452 1464 aaPredicted RBP3.6□□□□□ -1.83
SNX13-209ENST00000492626 BRAFP15056 766 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 KCNJ5P48544 419 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 BNIP3Q12983 259 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 RAB39AQ14964 217 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 NOLC1Q14978 699 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNX13-209ENST00000492626 XRRA1Q6P2D8 792 aa3.6□□□□□ -1.83
SNX13-209ENST00000492626 B3GNT9Q6UX72 402 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms