RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NOMO2Q5JPE7 1267 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 SPOUT1Q5T280 376 aaKnown RBP10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ATF7IP2Q5U623 682 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 PPFIBP1Q86W92 1011 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ZNF280BQ86YH2 543 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 MYCT1Q8N699 235 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ZBTB45Q96K62 511 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-219ENST00000491747 TARS2Q9BW92 718 aaKnown RBP10.22□□□□□ -0.77
BRCA1-219ENST00000491747 FUT8Q9BYC5 575 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 PTPRHQ9HD43 1115 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 TBC1D13Q9NVG8 400 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 SERTAD1Q9UHV2 236 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ABLIM1O14639 778 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 N4BP3O15049 544 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 DDHD2O94830 711 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 FAM13AO94988 1023 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 KRT18P05783 430 aaKnown RBP10.22□□□□□ -0.77
BRCA1-219ENST00000491747 NMT1P30419 496 aaKnown RBP10.22□□□□□ -0.77
BRCA1-219ENST00000491747 SLC20A2Q08357 652 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 LONRF2Q1L5Z9 754 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 HAUS6Q7Z4H7 955 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 LRRC43Q8N309 656 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 GSTCDQ8NEC7 633 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 NEK11Q8NG66 645 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 SPATA20Q8TB22 786 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 SPPL3Q8TCT6 385 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 P2RX5Q93086 422 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 GAD1Q99259 594 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 DESI2Q9BSY9 194 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 PLVAPQ9BX97 442 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ZHX3Q9H4I2 956 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 NRDE2Q9H7Z3 1164 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 PARVGQ9HBI0 331 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 TMEM51Q9NW97 253 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 KLK14Q9P0G3 267 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 LARSQ9P2J5 1176 aaKnown RBP10.22□□□□□ -0.77
BRCA1-219ENST00000491747 DNAJB4Q9UDY4 337 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 RWDD3Q9Y3V2 267 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ARL5CA6NH57 179 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 NT5C1B-RDH14C9J2C7 533 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 CSPG5O95196 566 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 POMCP01189 267 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 MLH1P40692 756 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 TMEM132AQ24JP5 1023 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 KCNT2Q6UVM3 1135 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 GLB1LQ6UWU2 654 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 SFR1Q86XK3 245 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 CEP120Q8N960 986 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 HNRNPLLQ8WVV9 542 aaKnown RBP10.21□□□□□ -0.77
BRCA1-219ENST00000491747 EXOC4Q96A65 974 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 TRIM6Q9C030 488 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-219ENST00000491747 HAPLN2Q9GZV7 340 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 SAMSN1Q9NSI8 373 aaKnown RBP10.21□□□□□ -0.77
BRCA1-219ENST00000491747 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 SNTG2Q9NY99 539 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 PSD3Q9NYI0 1048 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.77
BRCA1-219ENST00000491747 PDCD11Q14690 1871 aaKnown RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 INPPL1O15357 1258 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 ERLIN1O75477 346 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 PROZP22891 400 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 CASP1P29466 404 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 SMTNP53814 917 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 BCAR1P56945 870 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 FILIP1LQ4L180 1135 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 ZC2HC1CQ53FD0 456 aaPredicted RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 ZBTB33Q86T24 672 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 TMEM173Q86WV6 379 aaPredicted RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 MRPL38Q96DV4 380 aaKnown RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 C11orf84Q9BUA3 381 aaPredicted RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 MRPL4Q9BYD3 311 aaKnown RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 FGFBP2Q9BYJ0 223 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 GBP3Q9H0R5 595 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 CDT1Q9H211 546 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 IKZF4Q9H2S9 585 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 MRPL44Q9H9J2 332 aaKnown RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 LZTFL1Q9NQ48 299 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 LMCD1Q9NZU5 365 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 CWC15Q9P013 229 aaKnown RBP10.21□□□□□ -0.78
BRCA1-219ENST00000491747 PARP2Q9UGN5 583 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 CDC23Q9UJX2 597 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 PCDHGC5Q9Y5F6 944 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 ADGRG1Q9Y653 693 aa10.21□□□□□ -0.78
BRCA1-219ENST00000491747 CITO14578 2027 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 SOWAHDA6NJG2 315 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 K7ENM7 598 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
BRCA1-219ENST00000491747 GTPBP6O43824 516 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-219ENST00000491747 TBCAO75347 108 aaKnown RBP10.2□□□□□ -0.78
BRCA1-219ENST00000491747 FGF18O76093 207 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 LAG3P18627 525 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 IRS1P35568 1242 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 SCNN1GP51170 649 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 SPATA1Q5VX52 437 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 CNGA4Q8IV77 575 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms