RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CLUHO75153 1309 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 ADAM12O43184 909 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 PTMSP20962 102 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 CMA1P23946 247 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 NBL1P41271 181 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 NAMPTP43490 491 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 MAPK6Q16659 721 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 USP41Q3LFD5 358 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 GLRA4Q5JXX5 417 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 LILRA6Q6PI73 481 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 OTOP3Q7RTS5 596 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 DAW1Q8N136 415 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 CEP120Q8N960 986 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 SYT2Q8N9I0 419 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 DEPTORQ8TB45 409 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 SMG7Q92540 1137 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 ACSF2Q96CM8 615 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 EPSTI1Q96J88 318 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 PLIN2Q99541 437 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 TIPINQ9BVW5 301 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 C2orf40Q9H1Z8 148 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 KCNK12Q9HB15 430 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 KCND2Q9NZV8 630 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 GDAQ9Y2T3 454 aa12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 SF3B1O75533 1304 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMEM39A-211ENST00000491685 E9PMD0 336 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 ACKR2O00590 384 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 TADA2AO75478 443 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 PAPLNO95428 1278 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 KRT18P05783 430 aaKnown RBP12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 NPR3P17342 541 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 STAT6P42226 847 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 TDGQ13569 410 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 GET4Q7L5D6 327 aaPredicted RBP12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 TAS1R3Q7RTX0 852 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 CLSTN3Q9BQT9 956 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 RUSC1Q9BVN2 902 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 CUEDC2Q9H467 287 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 GOLGA2P5Q9HBQ8 144 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 FNIP2Q9P278 1114 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 USP25Q9UHP3 1055 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 FBXW11Q9UKB1 542 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 DUSP12Q9UNI6 340 aa12.08□□□□□ -0.48
TMEM39A-211ENST00000491685 ZNF292O60281 2723 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 A0A1W2PQ27 194 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 A0A1W2PQ64 194 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 A0A1W2PQD8 194 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 MEFVO15553 781 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 PI15O43692 258 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 PLA2G4BP0C869 781 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 ANK1P16157 1881 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 GBP2P32456 591 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 NTHL1P78549 312 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 CREMQ03060 361 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 GRIN1Q05586 938 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 MAPK7Q13164 816 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 ATF7IP2Q5U623 682 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 FAM171A1Q5VUB5 890 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 APBB1IPQ7Z5R6 666 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 CEP57Q86XR8 500 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 C3orf58Q8NDZ4 430 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 LNX1Q8TBB1 728 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 KIFAP3Q92845 792 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 IFT74Q96LB3 600 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 RHOBTB2Q9BYZ6 727 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 KCNH3Q9ULD8 1083 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 DMXL1Q9Y485 3027 aa12.07□□□□□ -0.48
TMEM39A-211ENST00000491685 GVINP1Q7Z2Y8 2422 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 MIA3Q5JRA6 1907 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 I3L4J1 428 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 HIP1RO75146 1068 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 ZMYND10O75800 440 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 THP07101 528 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 CFHP08603 1231 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 CLCNKBP51801 687 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PEX3P56589 373 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 SOX4Q06945 474 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 DHX8Q14562 1220 aaKnown RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PPP2R5AQ15172 486 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PSMD5Q16401 504 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 DCAF4L1Q3SXM0 396 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 AXDND1Q5T1B0 1012 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 RESP18Q5W5W9 173 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 SHC4Q6S5L8 630 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms