RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TRMT13Q9NUP7 481 aaKnown RBP15.02□□□□□ -0.01
SMPD4-219ENST00000491128 TAS2R14Q9NYV8 317 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 PIN4Q9Y237 131 aaKnown RBP15.02□□□□□ -0.01
SMPD4-219ENST00000491128 COQ4Q9Y3A0 265 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 DDX3XO00571 662 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 P4HA2O15460 535 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 KRT5P13647 590 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 DARSP14868 501 aaKnown RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 EIF4BP23588 611 aaKnown RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 AKAP5P24588 427 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 HOXD10P28358 340 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 CLDN10P78369 228 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 SNX17Q15036 470 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 GLRA4Q5JXX5 417 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 TRAPPC11Q7Z392 1133 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 LNX1Q8TBB1 728 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 RPF1Q9H9Y2 349 aaKnown RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 SNTG2Q9NY99 539 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 GTF2IRD1Q9UHL9 959 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 FBXL5Q9UKA1 691 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 FKTNO75072 461 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 URI1O94763 535 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-219ENST00000491128 NCOA4Q13772 614 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 SLC18A3Q16572 532 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 SLC10A6Q3KNW5 377 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 JADE1Q6IE81 842 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 SCARA5Q6ZMJ2 495 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 LRRN4CLQ8ND94 238 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 KLK14Q9P0G3 267 aa15.01□□□□□ -0.01
SMPD4-219ENST00000491128 SSU72P8A0A1W2PR75 194 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 KIF5CO60282 957 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 MOCS3O95396 460 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 VAV2P52735 878 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 POU5F1BQ06416 359 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 NFX1Q12986 1120 aaKnown RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 NAA30Q147X3 362 aaPredicted RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 ZNF410Q86VK4 478 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 OLIG1Q8TAK6 271 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 DDX20Q9UHI6 824 aaKnown RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 KIAA0391O15091 583 aaKnown RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 TMEM191BP0C7N4 346 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 CD58P19256 250 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 SCP2P22307 547 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 CASQ1P31415 396 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 NAP1L1P55209 391 aaKnown RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 HSP90AA2PQ14568 343 aaPredicted RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 FAM187BQ17R55 369 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 ZNF394Q53GI3 561 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 UPF3AQ9H1J1 476 aaKnown RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 RNF39Q9H2S5 420 aa15□□□□□ -0.01
SMPD4-219ENST00000491128 NOL12Q9UGY1 213 aaKnown RBP eCLIP15□□□□□ -0.01
SMPD4-219ENST00000491128 V9GYY5 206 aaPredicted RBP15□□□□□ -0.01
SMPD4-219ENST00000491128 RRP9O43818 475 aaKnown RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 FERP16591 822 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 ABCB4P21439 1286 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 GTF2H1P32780 548 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 MFAP3P55082 362 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 KIF5AQ12840 1032 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 WDR44Q5JSH3 913 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 MAP3K21Q5TCX8 1036 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 CCSAPQ6IQ19 270 aaPredicted RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 NOP9Q86U38 636 aaKnown RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 KLHDC9Q8NEP7 349 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 PRIMPOLQ96LW4 560 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 GOLPH3Q9H4A6 298 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 C1orf112Q9NSG2 853 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 NXF1Q9UBU9 619 aaKnown RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 NOC2LQ9Y3T9 749 aaKnown RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 CDY2AQ9Y6F7 541 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 CAPN6Q9Y6Q1 641 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 NOP14P78316 857 aaKnown RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 DUOXA2Q1HG44 320 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 ALKBH5Q6P6C2 394 aaKnown RBP14.99□□□□□ -0.01
SMPD4-219ENST00000491128 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 NAGPAQ9UK23 515 aa14.99□□□□□ -0.01
SMPD4-219ENST00000491128 GOLGA6L9A6NEM1 432 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 WEE2P0C1S8 567 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 GRK4P32298 578 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 THPOP40225 353 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 DNA2P51530 1060 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 CDR1P51861 262 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 MCCD1P59942 119 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-219ENST00000491128 ORC1Q13415 861 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 PTGISQ16647 500 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 WDR49Q8IV35 697 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 RPUSD2Q8IZ73 545 aaKnown RBP14.98□□□□□ -0.01
SMPD4-219ENST00000491128 ADPGKQ9BRR6 497 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 CFHR5Q9BXR6 569 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 ZMYND15Q9H091 742 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 SIP14410 1827 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 MEIS3P2A8K0S8 358 aa14.98□□□□□ -0.01
SMPD4-219ENST00000491128 LCA5LO95447 670 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms