RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 TCEAL4Q96EI5 215 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 NFKBIZQ9BYH8 718 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 MTRRQ9UBK8 725 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 RAB23Q9ULC3 237 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 NOTCH4Q99466 2003 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 EDN1P05305 212 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 THP07101 528 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 RARRES1P49788 294 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 POU5F1BQ06416 359 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 DMWDQ09019 674 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 ZNF687Q8N1G0 1237 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 CHRDQ9H2X0 955 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 BRD9Q9H8M2 597 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 GOLGA2P5Q9HBQ8 144 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 MRPS17Q9Y2R5 130 aaKnown RBP16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 GDAQ9Y2T3 454 aa16.94■□□□□ 0.3
SCAMP3-208ENST00000490999 COL4A2P08572 1712 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 GDF9O60383 454 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 FGFR3P22607 806 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 SATB1Q01826 763 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 ELAVL2Q12926 359 aaKnown RBP16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 FAM78AQ5JUQ0 283 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 LAIR1Q6GTX8 287 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 PDXDC1Q6P996 788 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 C3orf58Q8NDZ4 430 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 NETO1Q8TDF5 533 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 DNASE1L2Q92874 299 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 DDX27Q96GQ7 796 aaKnown RBP16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 BORCS6Q96GS4 357 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 CHAMP1Q96JM3 812 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 NELL2Q99435 816 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 CORO1BQ9BR76 489 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 NCANO14594 1321 aa16.93■□□□□ 0.3
SCAMP3-208ENST00000490999 SLC30A4O14863 429 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 B3GAT3O94766 335 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 PRKCBP05771 671 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 PSMA5P28066 241 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 CCR2P41597 374 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 BRCC3P46736 316 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 CLCNKBP51801 687 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 ROR1Q01973 937 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 PRSS36Q5K4E3 855 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 EEF1DP3Q658K8 133 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 CDCA2Q69YH5 1023 aaPredicted RBP16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 PPP4R3CPQ6ZMV5 832 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 ELSPBP1Q96BH3 223 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 HSD17B14Q9BPX1 270 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 FAM126AQ9BYI3 521 aaPredicted RBP16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 ANKEF1Q9NU02 776 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 PIAS3Q9Y6X2 628 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 ASPMQ8IZT6 3477 aa16.92■□□□□ 0.3
SCAMP3-208ENST00000490999 N4BP3O15049 544 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 LYPLA2O95372 231 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 LRG1P02750 347 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 HOXC13P31276 330 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 ARPP19P56211 112 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 NR5A1Q13285 461 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 PRPF4BQ13523 1007 aaKnown RBP16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 CD300LGQ6UXG3 332 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 PRR23CQ6ZRP0 262 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 RUFY3Q7L099 469 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 ZBTB8OSQ8IWT0 167 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 SEMA4GQ9NTN9 838 aa16.91■□□□□ 0.3
SCAMP3-208ENST00000490999 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 CHURC1-FNTBB4DL54 471 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 WNT7AO00755 349 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 PRRG1O14668 218 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 RETP07949 1114 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 GDI1P31150 447 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 VIPR2P41587 438 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 FNTBP49356 437 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 SIM2Q14190 667 aaPredicted RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 GAS6Q14393 721 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 HEATR6Q6AI08 1181 aaKnown RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 CPLX2Q6PUV4 134 aaKnown RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 VITQ6UXI7 678 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 FAM3CQ92520 227 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 ZSWIM3Q96MP5 696 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 TRMT61BQ9BVS5 477 aaKnown RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 FZD8Q9H461 694 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 LMAN1LQ9HAT1 526 aa16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
SCAMP3-208ENST00000490999 F5P12259 2224 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 MAN2B1O00754 1011 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 GJA1P17302 382 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 CCR3P51677 355 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 SCRN1Q12765 414 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 CALCRLQ16602 461 aa16.89■□□□□ 0.29
SCAMP3-208ENST00000490999 Q6ZS52 159 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms