RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 DDHD2O94830 711 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 ARHGEF15O94989 841 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 GALTP07902 379 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
TRA2A-208ENST00000490942 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRA2A-208ENST00000490942 BCAR1P56945 870 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 PSMD6Q15008 389 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 EPC2Q52LR7 807 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 SPOUT1Q5T280 376 aaKnown RBP17.18■□□□□ 0.34
TRA2A-208ENST00000490942 TTI2Q6NXR4 508 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
TRA2A-208ENST00000490942 ZNF280BQ86YH2 543 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 CBWD2Q8IUF1 395 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 SLC39A11Q8N1S5 342 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 COLGALT1Q8NBJ5 622 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 NELFBQ8WX92 580 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 ZMAT2Q96NC0 199 aaKnown RBP17.18■□□□□ 0.34
TRA2A-208ENST00000490942 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 ANO10Q9NW15 660 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 PLAGL2Q9UPG8 496 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 LZTS1Q9Y250 596 aa17.18■□□□□ 0.34
TRA2A-208ENST00000490942 GOLGA8IPA6NC78 632 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 GOLGA8JA6NMD2 632 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 H3BNC9 293 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 ZC3H11AO75152 810 aaKnown RBP eCLIP17.17■□□□□ 0.348e-9■□□□□ 8.4
TRA2A-208ENST00000490942 FGFR1OPO95684 399 aaKnown RBP17.17■□□□□ 0.34
TRA2A-208ENST00000490942 LRPAP1P30533 357 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 CTNNB1P35222 781 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 AP3M2P53677 418 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 CLDN10P78369 228 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 CYP24A1Q07973 514 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 TMEM132DQ14C87 1099 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 SPATA1Q5VX52 437 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 ANKRD40Q6AI12 368 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 INTS8Q75QN2 995 aaKnown RBP17.17■□□□□ 0.34
TRA2A-208ENST00000490942 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 TMC2Q8TDI7 906 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 CACTINQ8WUQ7 758 aaKnown RBP17.17■□□□□ 0.34
TRA2A-208ENST00000490942 LRCH3Q96II8 777 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 C17orf80Q9BSJ5 609 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 SPG21Q9NZD8 308 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 FAN1Q9Y2M0 1017 aa17.17■□□□□ 0.34
TRA2A-208ENST00000490942 GNA14O95837 355 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 PMS1P54277 932 aaKnown RBP17.16■□□□□ 0.34
TRA2A-208ENST00000490942 KRT17Q04695 432 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 STX1AQ16623 288 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 DPCR1Q3MIW9 517 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 GLRA4Q5JXX5 417 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 DCLRE1AQ6PJP8 1040 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 ZSWIM2Q8NEG5 633 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 BEST2Q8NFU1 509 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 KIF12Q96FN5 646 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 IGSF21Q96ID5 467 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 CXCL16Q9H2A7 254 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 TTYH1Q9H313 450 aaPredicted RBP17.16■□□□□ 0.34
TRA2A-208ENST00000490942 LMCD1Q9NZU5 365 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 DNAJB4Q9UDY4 337 aa17.16■□□□□ 0.34
TRA2A-208ENST00000490942 NRP1O14786 923 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 IKBKBO14920 756 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 B4GALT3O60512 393 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 AKAP3O75969 853 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 POU3F3P20264 500 aaPredicted RBP17.15■□□□□ 0.34
TRA2A-208ENST00000490942 SLC11A1P49279 550 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 UPP1Q16831 310 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 JADE1Q6IE81 842 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 KLHL10Q6JEL2 608 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 GPR65Q8IYL9 337 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 PARD3BQ8TEW8 1205 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 TMEM169Q96HH4 297 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 FNBP1Q96RU3 617 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 METTL14Q9HCE5 456 aaKnown RBP17.15■□□□□ 0.34
TRA2A-208ENST00000490942 INTS13Q9NVM9 706 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 PUF60Q9UHX1 559 aaKnown RBP17.15■□□□□ 0.34
TRA2A-208ENST00000490942 CTNND2Q9UQB3 1225 aa17.15■□□□□ 0.34
TRA2A-208ENST00000490942 TDRD15B5MCY1 1934 aaKnown RBP17.14■□□□□ 0.33
TRA2A-208ENST00000490942 FGF18O76093 207 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 EFEMP2O95967 443 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 NFICP08651 508 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 EPB41P11171 864 aaKnown RBP17.14■□□□□ 0.33
TRA2A-208ENST00000490942 OR1G1P47890 313 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 CASP4P49662 377 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 ELAVL2Q12926 359 aaKnown RBP17.14■□□□□ 0.33
TRA2A-208ENST00000490942 DUOXA2Q1HG44 320 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 CEP135Q66GS9 1140 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
TRA2A-208ENST00000490942 DDX53Q86TM3 631 aaKnown RBP17.14■□□□□ 0.33
TRA2A-208ENST00000490942 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 FAM186BQ8IYM0 893 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 CSGALNACT2Q8N6G5 542 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 KLHL23Q8NBE8 558 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 FAM212AQ96EL1 285 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 BORCS6Q96GS4 357 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 CGRRF1Q99675 332 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 DUSP9Q99956 384 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms