RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 RAB33AQ14088 237 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 AXDND1Q5T1B0 1012 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-216ENST00000490796 CWF19L1Q69YN2 538 aaKnown RBP21.61■■□□□ 1.05
SREBF1-216ENST00000490796 ANKS3Q6ZW76 656 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 C1orf186Q6ZWK4 172 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 DAW1Q8N136 415 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 CEP120Q8N960 986 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 SLC7A14Q8TBB6 771 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 GOLGA2P5Q9HBQ8 144 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 ARHGAP28Q9P2N2 729 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 CA14Q9ULX7 337 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 SFI1A8K8P3 1242 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 ADAM12O43184 909 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 HOXA9P31269 272 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 RAD51AP2Q09MP3 1159 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 IL17AQ16552 155 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 UPP1Q16831 310 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 UVSSAQ2YD98 709 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 MPZL3Q6UWV2 235 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 KCTD17Q8N5Z5 321 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 MTRRQ9UBK8 725 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 CDH7Q9ULB5 785 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 NUB1Q9Y5A7 615 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 CDY1Q9Y6F8 540 aa21.6■■□□□ 1.05
SREBF1-216ENST00000490796 DOCK8Q8NF50 2099 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 VWA3AA6NCI4 1184 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 I3L4J1 428 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 NPR3P17342 541 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 GUCY2CP25092 1073 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 GJB2P29033 226 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 TKTP29401 623 aaKnown RBP21.59■■□□□ 1.05
SREBF1-216ENST00000490796 MATR3P43243 847 aaKnown RBP eCLIP21.59■■□□□ 1.05
SREBF1-216ENST00000490796 ATP2C1P98194 919 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-216ENST00000490796 KCNK18Q7Z418 384 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 TMX3Q96JJ7 454 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 PLIN2Q99541 437 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 MMTAG2Q9BU76 263 aaKnown RBP21.59■■□□□ 1.05
SREBF1-216ENST00000490796 PTPRHQ9HD43 1115 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 ANKFY1Q9P2R3 1169 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 BACE2Q9Y5Z0 518 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 NUMBLQ9Y6R0 609 aa21.59■■□□□ 1.05
SREBF1-216ENST00000490796 RIF1Q5UIP0 2472 aaKnown RBP21.58■■□□□ 1.05
SREBF1-216ENST00000490796 PODXLO00592 558 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 PI15O43692 258 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 PLS3P13797 630 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 ELF1P32519 619 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 BRCC3P46736 316 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 NTHL1P78549 312 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 MAPK7Q13164 816 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 HTR4Q13639 388 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 MTSS1LQ765P7 747 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 RTL10Q7L3V2 364 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 CCDC105Q8IYK2 499 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 GPR152Q8TDT2 470 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 SPIRE2Q8WWL2 714 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 SNX27Q96L92 541 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 SMC3Q9UQE7 1217 aa21.58■■□□□ 1.05
SREBF1-216ENST00000490796 ANHXE9PGG2 379 aa21.57■■□□□ 1.04
SREBF1-216ENST00000490796 TAS1R3Q7RTX0 852 aa21.57■■□□□ 1.04
SREBF1-216ENST00000490796 SYT2Q8N9I0 419 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-216ENST00000490796 DTWD2Q8NBA8 298 aa21.57■■□□□ 1.04
SREBF1-216ENST00000490796 ST13P5Q8NFI4 369 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-216ENST00000490796 BICD1Q96G01 975 aa21.57■■□□□ 1.04
SREBF1-216ENST00000490796 KCND2Q9NZV8 630 aa21.57■■□□□ 1.04
SREBF1-216ENST00000490796 TRIP11Q15643 1979 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 KRBA1A5PL33 1030 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 H0YCG3 227 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 H7C4K7 107 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 TOM1L1O75674 476 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 PLA2G4BP0C869 781 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 KCNE1P15382 129 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 RPL9P32969 192 aaKnown RBP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 MCM2P49736 904 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 ARPP19P56211 112 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 SOX4Q06945 474 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 NOLC1Q14978 699 aaKnown RBP eCLIP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 PABPC1LQ4VXU2 614 aaKnown RBP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 XKR4Q5GH76 650 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 HYIQ5T013 277 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 ARL6IP4Q66PJ3 421 aaKnown RBP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 ALKAL1Q6UXT8 129 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 C3orf58Q8NDZ4 430 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 FGF13Q92913 245 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 NTPCRQ9BSD7 190 aaKnown RBP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 TBC1D17Q9HA65 648 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 ARHGEF3Q9NR81 526 aa21.56■■□□□ 1.04
SREBF1-216ENST00000490796 LARSQ9P2J5 1176 aaKnown RBP21.56■■□□□ 1.04
SREBF1-216ENST00000490796 PROB1E7EW31 1015 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 PRRG1O14668 218 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 SYN3O14994 580 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 CLDN3O15551 220 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 LRG1P02750 347 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 POU2F2P09086 479 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 PROZP22891 400 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 IGFBP6P24592 240 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-216ENST00000490796 NBL1P41271 181 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 VARS2Q5ST30 1063 aaKnown RBP21.55■■□□□ 1.04
SREBF1-216ENST00000490796 RASSF8Q8NHQ8 419 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 CALML4Q96GE6 196 aa21.55■■□□□ 1.04
SREBF1-216ENST00000490796 SHDQ96IW2 340 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms