RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SF3B1O75533 1304 aaKnown RBP eCLIP20.86■□□□□ 0.934e-7■■■■■ 40.1
EPHB4-207ENST00000489808 TMEM189-UBE2V1I3L0A0 370 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 TNFRSF10AO00220 468 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 FAM189A1O60320 539 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 B3GAT3O94766 335 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 GCNT3O95395 438 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 HOXB8P17481 243 aaPredicted RBP20.86■□□□□ 0.93
EPHB4-207ENST00000489808 CMA1P23946 247 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 IGFBP6P24592 240 aaPredicted RBP20.86■□□□□ 0.93
EPHB4-207ENST00000489808 KLRC2P26717 231 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 SOX4Q06945 474 aaPredicted RBP20.86■□□□□ 0.93
EPHB4-207ENST00000489808 KCNA1Q09470 495 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 L1TD1Q5T7N2 865 aaKnown RBP20.86■□□□□ 0.93
EPHB4-207ENST00000489808 CD300LGQ6UXG3 332 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 HASPINQ8TF76 798 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 B3GALT6Q96L58 329 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 ACCSQ96QU6 501 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 PYM1Q9BRP8 204 aaKnown RBP20.86■□□□□ 0.93
EPHB4-207ENST00000489808 MSTO1Q9BUK6 570 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 SCAND2PQ9GZW5 306 aaPredicted RBP20.86■□□□□ 0.93
EPHB4-207ENST00000489808 GOLGA2P5Q9HBQ8 144 aa20.86■□□□□ 0.93
EPHB4-207ENST00000489808 TTC26A0AVF1 554 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 TISP43B9A030 160 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 CXCL8P10145 99 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 MYBP10242 640 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 TNFSF9P41273 254 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 CASP5P51878 434 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 NUCB2P80303 420 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 ALCAMQ13740 583 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 ZBTB41Q5SVQ8 909 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 FAM171A1Q5VUB5 890 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 C18orf25Q96B23 403 aaPredicted RBP20.85■□□□□ 0.93
EPHB4-207ENST00000489808 FGFBP2Q9BYJ0 223 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 IKZF4Q9H2S9 585 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 RPF1Q9H9Y2 349 aaKnown RBP20.85■□□□□ 0.93
EPHB4-207ENST00000489808 EXOC7Q9UPT5 735 aa20.85■□□□□ 0.93
EPHB4-207ENST00000489808 LACTBL1A8MY62 500 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 TEX28O15482 410 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 ADRB2P07550 413 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 EPCAMP16422 314 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 ADSSP30520 456 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 RPL9P32969 192 aaKnown RBP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 CLCN4P51793 760 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 ELAVL2Q12926 359 aaKnown RBP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 POSTNQ15063 836 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 ZBTB6Q15916 424 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 ENOX2Q16206 610 aaKnown RBP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 TPRNQ4KMQ1 711 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 RIN2Q8WYP3 895 aaPredicted RBP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 TTPALQ9BTX7 342 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 PRKAG3Q9UGI9 489 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 SERTAD1Q9UHV2 236 aa20.84■□□□□ 0.93
EPHB4-207ENST00000489808 CPSF3Q9UKF6 684 aaKnown RBP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 USP15Q9Y4E8 981 aaPredicted RBP20.84■□□□□ 0.93
EPHB4-207ENST00000489808 A0A1B0GVL5 298 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 SLFN14P0C7P3 912 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 ASIC1P78348 528 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 RTP2Q5QGT7 225 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 CEP57Q86XR8 500 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 SUSD6Q92537 303 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 HPS3Q969F9 1004 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 TSPAN18Q96SJ8 248 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 APOL5Q9BWW9 433 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 CD320Q9NPF0 282 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 FNIP2Q9P278 1114 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 AGO2Q9UKV8 859 aaKnown RBP20.83■□□□□ 0.93
EPHB4-207ENST00000489808 HPSEQ9Y251 543 aa20.83■□□□□ 0.93
EPHB4-207ENST00000489808 MYH11P35749 1972 aa20.83■□□□□ 0.92
EPHB4-207ENST00000489808 TCF20Q9UGU0 1960 aaKnown RBP20.83■□□□□ 0.92
EPHB4-207ENST00000489808 CUL9Q8IWT3 2517 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 PODXLO00592 558 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 PRPF6O94906 941 aaKnown RBP20.82■□□□□ 0.92
EPHB4-207ENST00000489808 ADH1AP07327 375 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 PFKFB1P16118 471 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 AFMP43652 599 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 ACOT2P49753 483 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 PPP2R3AQ06190 1150 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 SPAG1Q07617 926 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 ADHFE1Q8IWW8 467 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 CD302Q8IX05 232 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 CEP57L1Q8IYX8 460 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 SYCP3Q8IZU3 236 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 GJD3Q8N144 294 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 LNX1Q8TBB1 728 aaPredicted RBP20.82■□□□□ 0.92
EPHB4-207ENST00000489808 POMGNT1Q8WZA1 660 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 KIF12Q96FN5 646 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 FBXL18Q96ME1 805 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 ADAM7Q9H2U9 754 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 TMEM206Q9H813 350 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 DZANK1Q9NVP4 752 aa20.82■□□□□ 0.92
EPHB4-207ENST00000489808 MUC3AQ02505 3323 aa20.81■□□□□ 0.92
EPHB4-207ENST00000489808 MYH15Q9Y2K3 1946 aa20.81■□□□□ 0.92
EPHB4-207ENST00000489808 FAM237AA0A1B0GTK4 181 aa20.81■□□□□ 0.92
EPHB4-207ENST00000489808 TRAPPC3O43617 180 aa20.81■□□□□ 0.92
EPHB4-207ENST00000489808 ACTN4O43707 911 aaKnown RBP20.81■□□□□ 0.92
EPHB4-207ENST00000489808 C1RP00736 705 aa20.81■□□□□ 0.92
EPHB4-207ENST00000489808 CYP3A5P20815 502 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms