RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RNF168Q8IYW5 571 aaPredicted RBP11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 KIAA0895Q8NCT3 520 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 NTPCRQ9BSD7 190 aaKnown RBP11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 STRA6Q9BX79 667 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 EPHX3Q9H6B9 360 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 PANK4Q9NVE7 773 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 USP20Q9Y2K6 914 aa11.54□□□□□ -0.56
SCAMP4-208ENST00000489554 H0YCG3 227 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 DCXO43602 365 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 LILRB3O75022 631 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 PPP1R37O75864 691 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 SMC2O95347 1197 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 EFEMP2O95967 443 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 THP07101 528 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 SCP2P22307 547 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 KLRC2P26717 231 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 GLUD2P49448 558 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 CASP5P51878 434 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 TYRO3Q06418 890 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 STRN3Q13033 797 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 STK4Q13043 487 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 HSP90AA2PQ14568 343 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 DPCR1Q3MIW9 517 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 TMEM31Q5JXX7 168 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 ISM2Q6H9L7 571 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 KIAA1841Q6NSI8 718 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 C11orf57Q6ZUT1 292 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 EPM2AIP1Q7L775 607 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 GPR65Q8IYL9 337 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 SLC22A17Q8WUG5 538 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 NECTIN4Q96NY8 510 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 KLHL5Q96PQ7 755 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 MED15Q96RN5 788 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 ACO2Q99798 780 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 ADAM7Q9H2U9 754 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 LARSQ9P2J5 1176 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 ADAM28Q9UKQ2 775 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 GDAQ9Y2T3 454 aa11.53□□□□□ -0.56
SCAMP4-208ENST00000489554 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 PTGESO14684 152 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 SLC16A4O15374 487 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 GPR37L1O60883 481 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 TADA2AO75478 443 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 ADH1AP07327 375 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CNPP09543 421 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 MCF2P10911 925 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 IDEP14735 1019 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 EPCAMP16422 314 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 GAP43P17677 238 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 HOXD13P35453 343 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 GRM5P41594 1212 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 MTHFRP42898 656 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 YARSP54577 528 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 NCKAP1LP55160 1127 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 NLRP12P59046 1061 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 DSG1Q02413 1049 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CREMQ03060 361 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 USP41Q3LFD5 358 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 ZNF658Q5TYW1 1059 aaPredicted RBP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 KIAA0319Q5VV43 1072 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 LRSAM1Q6UWE0 723 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 GAS2L3Q86XJ1 694 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC65Q8IXS2 484 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 TMEM161BQ8NDZ6 487 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 KCNN1Q92952 543 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC34Q96HJ3 373 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC94Q9BW85 323 aaPredicted RBP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CDT1Q9H211 546 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 PARVGQ9HBI0 331 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 PTPRHQ9HD43 1115 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 TOPORSQ9NS56 1045 aaPredicted RBP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CHST7Q9NS84 486 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 DPP7Q9UHL4 492 aa11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 SF3B1O75533 1304 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCAMP4-208ENST00000489554 CASTOR2A6NHX0 329 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 F8W810 466 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 C2CD2LO14523 706 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 TBCAO75347 108 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 FAM13AO94988 1023 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 C1RP00736 705 aa11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-208ENST00000489554 MAPTP10636 758 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms