RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ACRBPQ8NEB7 543 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 PARD3BQ8TEW8 1205 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 EEF2KMTQ96G04 330 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 NAP1L3Q99457 506 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 CHP1Q99653 195 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 GPR20Q99678 358 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 PLVAPQ9BX97 442 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 FGFBP2Q9BYJ0 223 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 INO80BQ9C086 356 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 INTS2Q9H0H0 1204 aaKnown RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 NLRC4Q9NPP4 1024 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 PRMT7Q9NVM4 692 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 ARHGAP20Q9P2F6 1191 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 CPA4Q9UI42 421 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 Q9Y3F1 56 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 RLFQ13129 1914 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 IGKV6-21A0A0C4DH24 114 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 GRID2IPA4D2P6 1211 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 LRRIQ4A6NIV6 560 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 F8VZ95 297 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ZBTB39O15060 712 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CLDN3O15551 220 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 IL18RAPO95256 599 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 H2AFZP0C0S5 128 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CYP2C8P10632 490 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 TNFAIP3P21580 790 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ARHGAP25P42331 645 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 PHKA2P46019 1235 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CASP4P49662 377 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 JAM2P57087 298 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CLDN10P78369 228 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 SP3Q02447 781 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CYP24A1Q07973 514 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 GOLGA8FQ08AF8 430 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 GOLGA8DPQ0D2H9 430 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 GRB14Q14449 540 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 KIF22Q14807 665 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 MTF1Q14872 753 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 PSMD6Q15008 389 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 BRD3Q15059 726 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 TAF1CQ15572 869 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 PKN2Q16513 984 aaKnown RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 DGKDQ16760 1214 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 KIAA0753Q2KHM9 967 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 DUSP28Q4G0W2 176 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 GLE1Q53GS7 698 aaKnown RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CCDC181Q5TID7 509 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 HGSNATQ68CP4 663 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 PLA2G4FQ68DD2 849 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CDCA2Q69YH5 1023 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ALKBH5Q6P6C2 394 aaKnown RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 C17orf99Q6UX52 265 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 TRIM72Q6ZMU5 477 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 H2AFVQ71UI9 128 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 MAEAQ7L5Y9 396 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 VASH1Q7L8A9 365 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ZNF410Q86VK4 478 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 NT5DC4Q86YG4 428 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 SLC35F6Q8N357 371 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 SH3TC2Q8TF17 1288 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CTNNBL1Q8WYA6 563 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ANKRD7Q92527 254 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ARMC5Q96C12 935 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 CRACR2AQ9BSW2 395 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 KATNAL1Q9BW62 490 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 XPNPEP1Q9NQW7 623 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 DNAJC12Q9UKB3 198 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 AGO2Q9UKV8 859 aaKnown RBP6.86□□□□□ -1.31
SF3A3-208ENST00000489537 MAP4K5Q9Y4K4 846 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 HYOU1Q9Y4L1 999 aa6.86□□□□□ -1.31
SF3A3-208ENST00000489537 DOCK3Q8IZD9 2030 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 A0A0B4J269 797 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 TARSL2A2RTX5 802 aaKnown RBP6.85□□□□□ -1.31
SF3A3-208ENST00000489537 ANKRD62A6NC57 917 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-208ENST00000489537 ACKR2O00590 384 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 OGTO15294 1046 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 ZEB2O60315 1214 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 MAN1A2O60476 641 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 TMEM253P0C7T8 217 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 MYBL1P10243 752 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 GNAT1P11488 350 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 P4HA1P13674 534 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 SLC9A1P19634 815 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 FSHRP23945 695 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 ADORA2AP29274 412 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 RGS2P41220 211 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 MATR3P43243 847 aaKnown RBP eCLIP6.85□□□□□ -1.31
SF3A3-208ENST00000489537 PDE6CP51160 858 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 HADHBP55084 474 aaKnown RBP6.85□□□□□ -1.31
SF3A3-208ENST00000489537 SP2Q02086 613 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 SP4Q02446 784 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 PTK2Q05397 1052 aa6.85□□□□□ -1.31
SF3A3-208ENST00000489537 KCNA1Q09470 495 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms