RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 LIG1P18858 919 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 TARSP26639 723 aaKnown RBP11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PFKPQ01813 784 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 ELAVL2Q12926 359 aaKnown RBP11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 RAB33AQ14088 237 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 CDCA2Q69YH5 1023 aaPredicted RBP11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 TSSK4Q6SA08 328 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 ZBTB8OSQ8IWT0 167 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 ATRIPQ8WXE1 791 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 MCRS1Q96EZ8 462 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PRIMPOLQ96LW4 560 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 OSBPL6Q9BZF3 934 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PLA2G2FQ9BZM2 168 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 MRPS23Q9Y3D9 190 aaKnown RBP11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 CDY1Q9Y6F8 540 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 I3L4J1 428 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 NEMFO60524 1076 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PFKFB2O60825 505 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PRKCBP05771 671 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 ATP2B1P20020 1258 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 FGFR3P22607 806 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 FAM187BQ17R55 369 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 SLC5A9Q2M3M2 681 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 GLRA4Q5JXX5 417 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 ZBTB41Q5SVQ8 909 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 EEF1DP3Q658K8 133 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PDXDC1Q6P996 788 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 BSNDQ8WZ55 320 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 HEBP1Q9NRV9 189 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 MTRRQ9UBK8 725 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 KCNH3Q9ULD8 1083 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 PCDHGA2Q9Y5H1 932 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 POU2F2P09086 479 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 SPATA31C1P0DKV0 1188 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 CEBPBP17676 345 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 TKTP29401 623 aaKnown RBP11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 CLCNKBP51801 687 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 FOSBP53539 338 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 UVSSAQ2YD98 709 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 ZBTB44Q8NCP5 570 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 MCPH1Q8NEM0 835 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 CLDN23Q96B33 292 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 CNTNAP3BQ96NU0 1288 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 MTMR9Q96QG7 549 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 ADPGKQ9BRR6 497 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 CNTNAP3Q9BZ76 1288 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 C2orf40Q9H1Z8 148 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 GOLGA2P5Q9HBQ8 144 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 BRMS1Q9HCU9 246 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 ZSCAN32Q9NX65 697 aa11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 SMG5Q9UPR3 1016 aaKnown RBP11.91□□□□□ -0.5
PTP4A2-206ENST00000489313 BTBD18B2RXH4 712 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 MED24O75448 989 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 ECI2O75521 394 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 B3GAT3O94766 335 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 RHOP08100 348 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 MAPK6Q16659 721 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 TANGO2Q6ICL3 276 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 CD300LGQ6UXG3 332 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 C3orf58Q8NDZ4 430 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 WASF1Q92558 559 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 CCDC113Q9H0I3 377 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 EPC1Q9H2F5 836 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 POLD4Q9HCU8 107 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.5
PTP4A2-206ENST00000489313 ZZEF1O43149 2961 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 ACKR2O00590 384 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 MAGEA9P43362 315 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 BRCC3P46736 316 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 ATXN1P54253 815 aaKnown RBP11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 MTAPQ13126 283 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 FZD5Q13467 585 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 ZNF852Q6ZMS4 543 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 DEPTORQ8TB45 409 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 NELL1Q92832 810 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 NELL2Q99435 816 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 GDE1Q9NZC3 331 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 USP18Q9UMW8 372 aa11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 NDRG2Q9UN36 371 aaKnown RBP11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 CNOT1A5YKK6 2376 aaKnown RBP11.89□□□□□ -0.51
PTP4A2-206ENST00000489313 TMEM189-UBE2V1I3L0A0 370 aa11.88□□□□□ -0.51
PTP4A2-206ENST00000489313 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
PTP4A2-206ENST00000489313 NCAM2O15394 837 aa11.88□□□□□ -0.51
PTP4A2-206ENST00000489313 LILRB5O75023 590 aa11.88□□□□□ -0.51
PTP4A2-206ENST00000489313 KRT37O76014 449 aa11.88□□□□□ -0.51
PTP4A2-206ENST00000489313 FCARP24071 287 aa11.88□□□□□ -0.51
PTP4A2-206ENST00000489313 RPS9P46781 194 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms