RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RBM12Q9NTZ6 932 aaKnown RBP5.39□□□□□ -1.55
XRN1-213ENST00000489241 PLA2G3Q9NZ20 509 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 L1RE1Q9UN81 338 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 NRP1O14786 923 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 SLC26A4O43511 780 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 AKR1B10O60218 316 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 TOX4O94842 621 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 CTSSP25774 331 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 HTR1BP28222 390 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 MCAMP43121 646 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 ALDH5A1P51649 535 aaPredicted RBP5.38□□□□□ -1.55
XRN1-213ENST00000489241 AK2P54819 239 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 SEMA5AQ13591 1074 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 NPNTQ6UXI9 565 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 C1orf210Q8IVY1 113 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 DPF2Q92785 391 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 EVI5LQ96CN4 794 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 CGRRF1Q99675 332 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 B3GNT5Q9BYG0 378 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 BHMT2Q9H2M3 363 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 TLR9Q9NR96 1032 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 ING3Q9NXR8 418 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 PCDHGB6Q9Y5F9 930 aa5.38□□□□□ -1.55
XRN1-213ENST00000489241 FAM171A2A8MVW0 826 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 PQBP1O60828 265 aaKnown RBP5.37□□□□□ -1.55
XRN1-213ENST00000489241 GYPEP15421 78 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 MCM7P33993 719 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 AGFG1P52594 562 aaKnown RBP5.37□□□□□ -1.55
XRN1-213ENST00000489241 NPEPPSP55786 919 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 FAM193AP78312 1265 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 DSC2Q02487 901 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 HHEXQ03014 270 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 PPP3CAQ08209 521 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 IL10RAQ13651 578 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 FHL2Q14192 279 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 GRM7Q14831 915 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 NOMO1Q15155 1222 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 GRAMD1BQ3KR37 738 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 LSM12Q3MHD2 195 aaKnown RBP5.37□□□□□ -1.55
XRN1-213ENST00000489241 FAM83BQ5T0W9 1011 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 DARS2Q6PI48 645 aaKnown RBP5.37□□□□□ -1.55
XRN1-213ENST00000489241 ABHD15Q6UXT9 468 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 ADGRE4PQ86SQ3 457 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 SRLQ86TD4 932 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 GPR135Q8IZ08 494 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 SHCBP1Q8NEM2 672 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 OR2I1PQ8NGU4 316 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 IL17DQ8TAD2 202 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 NLRC4Q9NPP4 1024 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 AURKAIP1Q9NWT8 199 aaPredicted RBP5.37□□□□□ -1.55
XRN1-213ENST00000489241 NCDNQ9UBB6 729 aa5.37□□□□□ -1.55
XRN1-213ENST00000489241 OVOL3O00110 214 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 NARSO43776 548 aaKnown RBP5.36□□□□□ -1.55
XRN1-213ENST00000489241 TMEM127O75204 238 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 GASTP01350 101 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 RPLP2P05387 115 aaKnown RBP5.36□□□□□ -1.55
XRN1-213ENST00000489241 ADSLP30566 484 aaPredicted RBP5.36□□□□□ -1.55
XRN1-213ENST00000489241 PER3P56645 1201 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 DUSP2Q05923 314 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 ACAP1Q15027 740 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 LONRF1Q17RB8 773 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 ANO6Q4KMQ2 910 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 CRB2Q5IJ48 1285 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 RNF220Q5VTB9 566 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 SWSAP1Q6NVH7 229 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 ERAP2Q6P179 960 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 FAM186BQ8IYM0 893 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 CMTM4Q8IZR5 234 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 OR5M3Q8NGP4 307 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 CACTINQ8WUQ7 758 aaKnown RBP5.36□□□□□ -1.55
XRN1-213ENST00000489241 KAT5Q92993 513 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 TNIP3Q96KP6 325 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 MYD88Q99836 296 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 FNIP2Q9P278 1114 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 POLHQ9Y253 713 aa5.36□□□□□ -1.55
XRN1-213ENST00000489241 A0A1W2PRX2 142 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 UBE2QL1A1L167 161 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 GOLIM4O00461 696 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PLSCR1O15162 318 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 CYP27B1O15528 508 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 ENDOD1O94919 500 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 FOSP01100 380 aaPredicted RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 C1SP09871 688 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 ECHS1P30084 290 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 HIBADHP31937 336 aaKnown RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 TM4SF4P48230 202 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 MAP2K6P52564 334 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 DGCR2P98153 550 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 MGAT2Q10469 447 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 RIN1Q13671 783 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 XRRA1Q6P2D8 792 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 PDZD4Q76G19 769 aaPredicted RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 COL23A1Q86Y22 540 aaPredicted RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 D2HGDHQ8N465 521 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 MSL3Q8N5Y2 521 aaKnown RBP5.35□□□□□ -1.55
XRN1-213ENST00000489241 AMER2Q8N7J2 671 aa5.35□□□□□ -1.55
XRN1-213ENST00000489241 ENAHQ8N8S7 591 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms