RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 LPIN1Q14693 890 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 SEZ6Q53EL9 994 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 IQCEQ6IPM2 695 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 PHLDB3Q6NSJ2 640 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 EFCAB13Q8IY85 973 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 TMEM192Q8IY95 271 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 OR5B17Q8NGF7 314 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 CXorf38Q8TB03 319 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 SNX27Q96L92 541 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 EIF2AQ9BY44 585 aaKnown RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 GPR88Q9GZN0 384 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 TRPV6Q9H1D0 765 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 VRTNQ9H8Y1 702 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 ST3GAL5Q9UNP4 418 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 PDCD11Q14690 1871 aaKnown RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 CITO14578 2027 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 LACTBL1A8MY62 500 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 F8VZ95 297 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 ZNF623O75123 536 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 CAPN15O75808 1086 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 NPTXRO95502 500 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 STAU1O95793 577 aaKnown RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 ASS1P00966 412 aaKnown RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 HLA-DRAP01903 254 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 APBA1Q02410 837 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 BFSP2Q13515 415 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 ZBTB6Q15916 424 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 ZNF618Q5T7W0 954 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 SFMBT2Q5VUG0 894 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 HGSNATQ68CP4 663 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 RRAGAQ7L523 313 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 TRAPPC11Q7Z392 1133 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 HELQQ8TDG4 1101 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 TAF4BQ92750 862 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 SPTLC3Q9NUV7 552 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 ZNHIT6Q9NWK9 470 aaKnown RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 DNAJC12Q9UKB3 198 aa13.85□□□□□ -0.19
TOP3A-206ENST00000489131 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 BZW2Q9Y6E2 419 aaKnown RBP13.85□□□□□ -0.19
TOP3A-206ENST00000489131 TANC1Q9C0D5 1861 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 LCA5LO95447 670 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 SERPING1P05155 500 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 CTSHP09668 335 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 KCNE1P15382 129 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 RAB27AP51159 221 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 ASTE1Q2TB18 679 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-206ENST00000489131 IRF2BP2Q7Z5L9 587 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 MRPL10Q7Z7H8 261 aaKnown RBP13.84□□□□□ -0.19
TOP3A-206ENST00000489131 SMG8Q8ND04 991 aaKnown RBP13.84□□□□□ -0.19
TOP3A-206ENST00000489131 SHC3Q92529 594 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 ANKRD36BP1Q96IX9 119 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 NT5C1BQ96P26 610 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 MTMR12Q9C0I1 747 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 FAM124BQ9H5Z6 455 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-206ENST00000489131 NLRC4Q9NPP4 1024 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 PADI3Q9ULW8 664 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 IPPQ9Y573 584 aa13.84□□□□□ -0.19
TOP3A-206ENST00000489131 GFPT2O94808 682 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 PARNO95453 639 aaKnown RBP13.83□□□□□ -0.2
TOP3A-206ENST00000489131 TNNC2P02585 160 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 NFICP08651 508 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SKIP12755 728 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SELPP16109 830 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 FERP16591 822 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 MSNP26038 577 aaKnown RBP13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SOX5P35711 763 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 STAT1P42224 750 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 PIK3CAP42336 1068 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 YARSP54577 528 aaKnown RBP13.83□□□□□ -0.2
TOP3A-206ENST00000489131 MFAP3P55082 362 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 OSTNP61366 133 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 PAK2Q13177 524 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 NCOA4Q13772 614 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 MBTPS1Q14703 1052 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SGSM1Q2NKQ1 1148 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 RAD9BQ6WBX8 426 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SLC39A5Q6ZMH5 540 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 KREMEN1Q96MU8 473 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 CHP1Q99653 195 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SYT11Q9BT88 431 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 TRIM6Q9C030 488 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-206ENST00000489131 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 NXF3Q9H4D5 531 aaKnown RBP13.83□□□□□ -0.2
TOP3A-206ENST00000489131 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 C1orf112Q9NSG2 853 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 SNTG2Q9NY99 539 aa13.83□□□□□ -0.2
TOP3A-206ENST00000489131 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms