RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
CTNNB1-215ENST00000488914 LCORLQ8N3X6 602 aa6.06□□□□□ -1.44
CTNNB1-215ENST00000488914 ZFP28Q8NHY6 868 aa6.06□□□□□ -1.44
CTNNB1-215ENST00000488914 RAX2Q96IS3 184 aa6.06□□□□□ -1.44
CTNNB1-215ENST00000488914 SCOCQ9UIL1 159 aa6.06□□□□□ -1.44
CTNNB1-215ENST00000488914 PIPSLA2A3N6 862 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 CCDC78A2IDD5 438 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 WDHD1O75717 1129 aaPredicted RBP6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 ALOX15P16050 662 aaPredicted RBP6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 DDX6P26196 483 aaKnown RBP eCLIP6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 CLRN1P58418 232 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 MRPS9P82933 396 aaKnown RBP6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 PPP3CAQ08209 521 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 TOR2AQ5JU69 321 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 AGAP9Q5VTM2 703 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 ZNF572Q7Z3I7 529 aaPredicted RBP6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 OR7D4Q8NG98 312 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 LINC00476Q8WZB0 136 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 LDAHQ9H6V9 325 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 IFT122Q9HBG6 1241 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 GABBR1Q9UBS5 961 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 SWAP70Q9UH65 585 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 APOBEC2Q9Y235 224 aaKnown RBP6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 FPGT-TNNI3KV9GXZ4 949 aa6.05□□□□□ -1.44
CTNNB1-215ENST00000488914 ZAR1LA6NP61 321 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 PHF2O75151 1096 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 BDNFP23560 247 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 SREBF1P36956 1147 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 PTH2RP49190 550 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 SEC24CP53992 1094 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 USP14P54578 494 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 SRSF2Q01130 221 aaKnown RBP6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 TAP1Q03518 808 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 SCAPQ12770 1279 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 TSHZ3Q63HK5 1081 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 AFMIDQ63HM1 303 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 MED25Q71SY5 747 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 C11orf96Q7Z7L8 435 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 SUPT20HQ8NEM7 779 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 OR56A1Q8NGH5 318 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 AUTS2Q8WXX7 1259 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 HOXB13Q92826 284 aaPredicted RBP6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 BBC3Q96PG8 261 aaPredicted RBP6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 ORAI2Q96SN7 254 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 ZSWIM1Q9BR11 485 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 BCO1Q9HAY6 547 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 KLHL11Q9NVR0 708 aa6.04□□□□□ -1.44
CTNNB1-215ENST00000488914 SALL3Q9BXA9 1300 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 PJA2O43164 708 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 EPB41L2O43491 1005 aaKnown RBP6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 PRSS23O95084 383 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 CFIP05156 583 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 HSP90AA1P07900 732 aaKnown RBP6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 EGR2P11161 476 aaPredicted RBP6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 TYRP1P17643 537 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 COPB2P35606 906 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 RHBDL3P58872 404 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 STAT4Q14765 748 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 B3GNTL1Q67FW5 361 aaPredicted RBP6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 ZNF280DQ6N043 979 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 PRIMA1Q86XR5 153 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 AFAP1L2Q8N4X5 818 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 MRI1Q9BV20 369 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 CAAP1Q9H8G2 361 aa6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 FBXO9Q9UK97 447 aaPredicted RBP6.03□□□□□ -1.44
CTNNB1-215ENST00000488914 ZNF500O60304 480 aaPredicted RBP6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 EYA4O95677 639 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 SPATA31D3P0C874 917 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 FPR1P21462 350 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 SLC6A2P23975 617 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 ECHS1P30084 290 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 GPR3P46089 330 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 MASP1P48740 699 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 TMPRSS15P98073 1019 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 BIRC2Q13490 618 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 SEPT2Q15019 361 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 CCDC96Q2M329 555 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 PLEKHG6Q3KR16 790 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 SPATA31D4Q6ZUB0 917 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 RHOT2Q8IXI1 618 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 PQLC1Q8N2U9 271 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 FATE1Q969F0 183 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 CAVIN3Q969G5 261 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 PAWRQ96IZ0 340 aaKnown RBP6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 MYOCQ99972 504 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 GREM2Q9H772 168 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 ALG13Q9NP73 1137 aaKnown RBP6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 C14orf119Q9NWQ9 140 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 SIK3Q9Y2K2 1263 aa6.02□□□□□ -1.45
CTNNB1-215ENST00000488914 SNRPA1P09661 255 aaKnown RBP6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 RAP2AP10114 183 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 ITGAMP11215 1152 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 MPLP40238 635 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 ALDH1A3P47895 512 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 TBX4P57082 545 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 NOMO1Q15155 1222 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 RNF187Q5TA31 235 aaPredicted RBP6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 GPR149Q86SP6 731 aa6.01□□□□□ -1.45
CTNNB1-215ENST00000488914 ADGRG3Q86Y34 549 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms