RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ATRNL1Q5VV63 1379 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 MANSC4A6NHS7 340 aaPredicted RBP4.06□□□□□ -1.76
CCDC93-209ENST00000488908 AKR1B10O60218 316 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 ERN1O75460 977 aaKnown RBP4.06□□□□□ -1.76
CCDC93-209ENST00000488908 ASMTLO95671 621 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 PRKCGP05129 697 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 SCNN1BP51168 640 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 GPR162Q16538 588 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 GJC2Q5T442 439 aaPredicted RBP4.06□□□□□ -1.76
CCDC93-209ENST00000488908 AFMIDQ63HM1 303 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 C11orf74Q86VG3 221 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 DPF1Q92782 380 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.06□□□□□ -1.76
CCDC93-209ENST00000488908 BCO1Q9HAY6 547 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 SPTLC3Q9NUV7 552 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 MOCS1Q9NZB8 636 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 USP25Q9UHP3 1055 aa4.06□□□□□ -1.76
CCDC93-209ENST00000488908 TRGV11A0A075B6L2 103 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 CCDC78A2IDD5 438 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 BMP15O95972 392 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 LPLP06858 475 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 RAP2AP10114 183 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 IL2RBP14784 551 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 ATP5JP18859 108 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 ADSLP30566 484 aaPredicted RBP4.05□□□□□ -1.76
CCDC93-209ENST00000488908 LSSP48449 732 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 SOX10P56693 466 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 EXOSC10Q01780 885 aaKnown RBP4.05□□□□□ -1.76
CCDC93-209ENST00000488908 UBXN2BQ14CS0 331 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 SYNPOQ8N3V7 929 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 FBXO18Q8NFZ0 1043 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 C8orf37Q96NL8 207 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 UHRF1Q96T88 793 aaPredicted RBP4.05□□□□□ -1.76
CCDC93-209ENST00000488908 KAT6AQ92794 2004 aa4.05□□□□□ -1.76
CCDC93-209ENST00000488908 ZNF804BA4D1E1 1349 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 YY2O15391 372 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 CKBP12277 381 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 POU3F3P20264 500 aaPredicted RBP4.04□□□□□ -1.76
CCDC93-209ENST00000488908 ECHS1P30084 290 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 PTGER1P34995 402 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 IL2P60568 153 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 NFE2L2Q16236 605 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 GEN1Q17RS7 908 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 TSTD2Q5T7W7 516 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 KAZNQ674X7 775 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 KIAA0895LQ68EN5 471 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 FAM180AQ6UWF9 173 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 LRRTM3Q86VH5 581 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 RIN2Q8WYP3 895 aaPredicted RBP4.04□□□□□ -1.76
CCDC93-209ENST00000488908 ZBTB9Q96C00 473 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 OSBPL2Q9H1P3 480 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 FLRT1Q9NZU1 646 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 CDK11AQ9UQ88 783 aaPredicted RBP4.04□□□□□ -1.76
CCDC93-209ENST00000488908 SIK3Q9Y2K2 1263 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 NOC2LQ9Y3T9 749 aaKnown RBP4.04□□□□□ -1.76
CCDC93-209ENST00000488908 CCDC9Q9Y3X0 531 aaKnown RBP4.04□□□□□ -1.76
CCDC93-209ENST00000488908 WNT6Q9Y6F9 365 aa4.04□□□□□ -1.76
CCDC93-209ENST00000488908 FAM83GA6ND36 823 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 MPPED1O15442 326 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 SLC6A2P23975 617 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 ITPKBP27987 946 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 GRIA3P42263 894 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 MAPK10P53779 464 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 KRTAP10-6P60371 365 aaPredicted RBP4.03□□□□□ -1.76
CCDC93-209ENST00000488908 SF3B3Q15393 1217 aaKnown RBP4.03□□□□□ -1.76
CCDC93-209ENST00000488908 NBPF8Q3BBV2 869 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 CT83Q5H943 113 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 BROXQ5VW32 411 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 FCRLBQ6BAA4 426 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 ZNF529Q6P280 563 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 CNNM4Q6P4Q7 775 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 Q6ZVL8 140 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 PEG10Q86TG7 708 aaKnown RBP4.03□□□□□ -1.76
CCDC93-209ENST00000488908 RASSF3Q86WH2 238 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 GPR156Q8NFN8 814 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 OR2W6PQ8NHA6 318 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 SH3TC2Q8TF17 1288 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 FCRL4Q96PJ5 515 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 MED15Q96RN5 788 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 PNKPQ96T60 521 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 TMEM260Q9NX78 707 aa4.03□□□□□ -1.76
CCDC93-209ENST00000488908 PRSS23O95084 383 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 FKBP9O95302 570 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 SREBF1P36956 1147 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 PER3P56645 1201 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 EIF2B5Q13144 721 aaKnown RBP4.02□□□□□ -1.77
CCDC93-209ENST00000488908 LLGL1Q15334 1064 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 UGT8Q16880 541 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 MTX3Q5HYI7 312 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 OTUD7BQ6GQQ9 843 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 FKBP9P1Q75LS8 142 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 PPM1KQ8N3J5 372 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 VGLL2Q8N8G2 317 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 SLC5A5Q92911 643 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 EAF2Q96CJ1 260 aaPredicted RBP4.02□□□□□ -1.77
CCDC93-209ENST00000488908 MARS2Q96GW9 593 aaKnown RBP4.02□□□□□ -1.77
CCDC93-209ENST00000488908 FBXL20Q96IG2 436 aa4.02□□□□□ -1.77
CCDC93-209ENST00000488908 SENP6Q9GZR1 1112 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms