RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 KARSQ15046 597 aaKnown RBP13.53□□□□□ -0.24
SFXN5-219ENST00000488839 TMEM31Q5JXX7 168 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 CCDC73Q6ZRK6 1079 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
SFXN5-219ENST00000488839 AUTS2Q8WXX7 1259 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
SFXN5-219ENST00000488839 PPP1R10Q96QC0 940 aaKnown RBP13.53□□□□□ -0.24
SFXN5-219ENST00000488839 REEP2Q9BRK0 252 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 GPR62Q9BZJ7 368 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 ST6GALNAC4Q9H4F1 302 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
SFXN5-219ENST00000488839 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 TEX28O15482 410 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 TRAK2O60296 914 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.25
SFXN5-219ENST00000488839 GLUD1P00367 558 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 PIGRP01833 764 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 EPCAMP16422 314 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 RPL9P32969 192 aaKnown RBP13.52□□□□□ -0.25
SFXN5-219ENST00000488839 POU5F1Q01860 360 aaKnown RBP13.52□□□□□ -0.25
SFXN5-219ENST00000488839 MCL1Q07820 350 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 RAD51AP2Q09MP3 1159 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 MCM6Q14566 821 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 NOLC1Q14978 699 aaKnown RBP eCLIP13.52□□□□□ -0.25
SFXN5-219ENST00000488839 RRAGBQ5VZM2 374 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 RTL10Q7L3V2 364 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 TAS1R1Q7RTX1 841 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 RNF135Q8IUD6 432 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 MYCT1Q8N699 235 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 EPSTI1Q96J88 318 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 USP20Q9Y2K6 914 aa13.52□□□□□ -0.25
SFXN5-219ENST00000488839 ARIH1Q9Y4X5 557 aaPredicted RBP13.52□□□□□ -0.25
SFXN5-219ENST00000488839 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 YEATS4O95619 227 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 HSP90AA1P07900 732 aaKnown RBP13.51□□□□□ -0.25
SFXN5-219ENST00000488839 MARCKSP29966 332 aaPredicted RBP13.51□□□□□ -0.25
SFXN5-219ENST00000488839 GTF2BQ00403 316 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 UPP1Q16831 310 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.51□□□□□ -0.25
SFXN5-219ENST00000488839 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 CD302Q8IX05 232 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 USP28Q96RU2 1077 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 LRRC27Q9C0I9 530 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 TBX20Q9UMR3 447 aa13.51□□□□□ -0.25
SFXN5-219ENST00000488839 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 C2CD2LO14523 706 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 B3GAT3O94766 335 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 KIF4AO95239 1232 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 CLTAP09496 248 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 GAP43P17677 238 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 PAX3P23760 479 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 DHX8Q14562 1220 aaKnown RBP13.5□□□□□ -0.25
SFXN5-219ENST00000488839 STK38Q15208 465 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 FAM171A1Q5VUB5 890 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 SLFN12LQ6IEE8 588 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 LILRA6Q6PI73 481 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 ZDHHC14Q8IZN3 488 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 LINC00301Q8NCQ3 95 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 LRRC15Q8TF66 581 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
SFXN5-219ENST00000488839 BICD1Q96G01 975 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 RPGRIP1Q96KN7 1286 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 SNX27Q96L92 541 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 PAAF1Q9BRP4 392 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 ZDHHC7Q9NXF8 308 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 MYH11P35749 1972 aa13.5□□□□□ -0.25
SFXN5-219ENST00000488839 F8W810 466 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 K7ENM7 598 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 SPTLC2O15270 562 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
SFXN5-219ENST00000488839 ADRB2P07550 413 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 CYP3A5P20815 502 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 FGFR3P22607 806 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 LIG4P49917 911 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 CLCNKBP51801 687 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 RTP2Q5QGT7 225 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
SFXN5-219ENST00000488839 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 MAP4K3Q8IVH8 894 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 CEP120Q8N960 986 aa13.49□□□□□ -0.25
SFXN5-219ENST00000488839 LNX1Q8TBB1 728 aaPredicted RBP13.49□□□□□ -0.25
SFXN5-219ENST00000488839 EDAQ92838 391 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms