RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NUB1Q9Y5A7 615 aa14.03□□□□□ -0.16
PHF1-210ENST00000488767 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
PHF1-210ENST00000488767 STYXL1Q9Y6J8 313 aa14.03□□□□□ -0.16
PHF1-210ENST00000488767 TDRD15B5MCY1 1934 aaKnown RBP14.02□□□□□ -0.16
PHF1-210ENST00000488767 ANKRD63C9JTQ0 380 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 H3BQ06 376 aaPredicted RBP14.02□□□□□ -0.17
PHF1-210ENST00000488767 TMEM189-UBE2V1I3L0A0 370 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 C2CD2LO14523 706 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
PHF1-210ENST00000488767 KIF4AO95239 1232 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 ADH1AP07327 375 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 KLRC2P26717 231 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 CASP5P51878 434 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 PSMD2Q13200 908 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 ADAM15Q13444 863 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 COL19A1Q14993 1142 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 PTPN14Q15678 1187 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 CTC1Q2NKJ3 1217 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 SLC10A6Q3KNW5 377 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 GRAMD1CQ8IYS0 662 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 BEST2Q8NFU1 509 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 HASPINQ8TF76 798 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 NOC3LQ8WTT2 800 aaKnown RBP14.02□□□□□ -0.17
PHF1-210ENST00000488767 CASP10Q92851 521 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 ASB7Q9H672 318 aa14.02□□□□□ -0.17
PHF1-210ENST00000488767 CPSF3Q9UKF6 684 aaKnown RBP14.02□□□□□ -0.17
PHF1-210ENST00000488767 UBQLN1Q9UMX0 589 aaKnown RBP14.02□□□□□ -0.17
PHF1-210ENST00000488767 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 PODXLO00592 558 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 ZNF202O95125 648 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 IL18RAPO95256 599 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 GTF2F1P35269 517 aaKnown RBP eCLIP14.01□□□□□ -0.17
PHF1-210ENST00000488767 TNFSF9P41273 254 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 ACOT2P49753 483 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 CLCNKBP51801 687 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 SNRPFP62306 86 aaKnown RBP14.01□□□□□ -0.17
PHF1-210ENST00000488767 NAB2Q15742 525 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
PHF1-210ENST00000488767 UPP1Q16831 310 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 FAM171A1Q5VUB5 890 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 LLGL2Q6P1M3 1020 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 SLC39A4Q6P5W5 647 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 GPR65Q8IYL9 337 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 GOLGA5Q8TBA6 731 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 AUTS2Q8WXX7 1259 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 RABGGTAQ92696 567 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 HPS3Q969F9 1004 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 FAM213AQ9BRX8 229 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 TTPALQ9BTX7 342 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 KIAA1586Q9HCI6 787 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 DZANK1Q9NVP4 752 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 CGNQ9P2M7 1197 aaKnown RBP14.01□□□□□ -0.17
PHF1-210ENST00000488767 CD207Q9UJ71 328 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 DERAQ9Y315 318 aa14.01□□□□□ -0.17
PHF1-210ENST00000488767 PRUNE2Q8WUY3 3088 aa14□□□□□ -0.17
PHF1-210ENST00000488767 LACTBL1A8MY62 500 aa14□□□□□ -0.17
PHF1-210ENST00000488767 LINC01565O15544 149 aa14□□□□□ -0.17
PHF1-210ENST00000488767 CLASP2O75122 1294 aaKnown RBP14□□□□□ -0.17
PHF1-210ENST00000488767 RPN1P04843 607 aaKnown RBP14□□□□□ -0.17
PHF1-210ENST00000488767 HOXB8P17481 243 aaPredicted RBP14□□□□□ -0.17
PHF1-210ENST00000488767 CYP3A5P20815 502 aa14□□□□□ -0.17
PHF1-210ENST00000488767 CASP1P29466 404 aa14□□□□□ -0.17
PHF1-210ENST00000488767 DSG1Q02413 1049 aa14□□□□□ -0.17
PHF1-210ENST00000488767 FAM160A1Q05DH4 1040 aa14□□□□□ -0.17
PHF1-210ENST00000488767 EHHADHQ08426 723 aa14□□□□□ -0.17
PHF1-210ENST00000488767 KCNA1Q09470 495 aa14□□□□□ -0.17
PHF1-210ENST00000488767 TMEM132DQ14C87 1099 aa14□□□□□ -0.17
PHF1-210ENST00000488767 PTCRAQ6ISU1 281 aaPredicted RBP14□□□□□ -0.17
PHF1-210ENST00000488767 PDZRN4Q6ZMN7 1036 aaPredicted RBP14□□□□□ -0.17
PHF1-210ENST00000488767 CLEC17AQ6ZS10 378 aa14□□□□□ -0.17
PHF1-210ENST00000488767 ZNF507Q8TCN5 953 aa14□□□□□ -0.17
PHF1-210ENST00000488767 RIN2Q8WYP3 895 aaPredicted RBP14□□□□□ -0.17
PHF1-210ENST00000488767 ZMAT2Q96NC0 199 aaKnown RBP14□□□□□ -0.17
PHF1-210ENST00000488767 PAAF1Q9BRP4 392 aa14□□□□□ -0.17
PHF1-210ENST00000488767 VN1R3Q9BXE9 311 aa14□□□□□ -0.17
PHF1-210ENST00000488767 GPR62Q9BZJ7 368 aa14□□□□□ -0.17
PHF1-210ENST00000488767 HAPLN2Q9GZV7 340 aa14□□□□□ -0.17
PHF1-210ENST00000488767 GOLGA2P5Q9HBQ8 144 aa14□□□□□ -0.17
PHF1-210ENST00000488767 SLC39A2Q9NP94 309 aa14□□□□□ -0.17
PHF1-210ENST00000488767 RMND1Q9NWS8 449 aa14□□□□□ -0.17
PHF1-210ENST00000488767 RBAKQ9NYW8 714 aaPredicted RBP14□□□□□ -0.17
PHF1-210ENST00000488767 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
PHF1-210ENST00000488767 UNC80Q8N2C7 3258 aa14□□□□□ -0.17
PHF1-210ENST00000488767 ARHGEF37A1IGU5 675 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 TISP43B9A030 160 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 F8W810 466 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 EXTL3O43909 919 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 FAM189A1O60320 539 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
PHF1-210ENST00000488767 PAX3P23760 479 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 ADSSP30520 456 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 MCM4P33991 863 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 KCNQ1P51787 676 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 SMAD4Q13485 552 aaKnown RBP13.99□□□□□ -0.17
PHF1-210ENST00000488767 CLUL1Q15846 466 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 KMT5BQ4FZB7 885 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 ZBTB41Q5SVQ8 909 aa13.99□□□□□ -0.17
PHF1-210ENST00000488767 CES5AQ6NT32 575 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms