RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CYP26A1O43174 497 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 RAD21O60216 631 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 TTC4O95801 387 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 ENO1P06733 434 aaKnown RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 ZNF24P17028 368 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 CYP11B2P19099 503 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 COILP38432 576 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 KCNA1Q09470 495 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 MAPK6Q16659 721 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 B2RBV5 119 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 FOXD2O60548 495 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 HAUS5O94927 633 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 ALOX15P16050 662 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 COMTP21964 271 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 DLG1Q12959 904 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 CDC16Q13042 620 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 ART4Q93070 314 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 CCDC124Q96CT7 223 aaKnown RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 INIPQ9NRY2 104 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 CHST7Q9NS84 486 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 EMILIN3Q9NT22 766 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 NINJ2Q9NZG7 142 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 STX18Q9P2W9 335 aaKnown RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 SORBS2O94875 1100 aaKnown RBP17.17■□□□□ 0.34
MCF2L-229ENST00000488765 ANPEPP15144 967 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 PCSK6P29122 969 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 CALCRLQ16602 461 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 PNMA1Q8ND90 353 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 RUNDC3BQ96NL0 473 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 SHCBP1LQ9BZQ2 653 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 BRD8Q9H0E9 1235 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 PRDM16Q9HAZ2 1276 aa17.17■□□□□ 0.34
MCF2L-229ENST00000488765 SPOPO43791 374 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 CALM1P0DP23 149 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 CALM2P0DP24 149 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 CALM3P0DP25 149 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 CHRNA3P32297 505 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 TFAP4Q01664 338 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 MECOMQ03112 1051 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 CCDC15Q0P6D6 951 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 NCOA4Q13772 614 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 PPP2R5BQ15173 497 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 LVRNQ6Q4G3 990 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 ZBTB46Q86UZ6 589 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 PIP4K2CQ8TBX8 421 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 SCFD1Q8WVM8 642 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 HAPLN3Q96S86 360 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 IQCGQ9H095 443 aaKnown RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 TTC7AQ9ULT0 858 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 STARD13Q9Y3M8 1113 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 PCDHA3Q9Y5H8 950 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 MEIS1O00470 390 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 PENKP01210 267 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 RPL13P26373 211 aaKnown RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 VARSP26640 1264 aaKnown RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 STAT1P42224 750 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 ACVR2BQ13705 512 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 SEPT7Q16181 437 aaKnown RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 PPP1R21Q6ZMI0 780 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 SLC20A1Q8WUM9 679 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 RFFLQ8WZ73 363 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 ROPN1BQ9BZX4 212 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 GRIP2Q9C0E4 1043 aa17.16■□□□□ 0.34
MCF2L-229ENST00000488765 ROPN1Q9HAT0 212 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
MCF2L-229ENST00000488765 GLI3P10071 1580 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 PODXLO00592 558 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ECE2O60344 883 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 EDF1O60869 148 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TTLL1O95922 423 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ADRA1DP25100 572 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ATP5DP30049 168 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 KLHL4Q9C0H6 718 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TRABDQ9H4I3 376 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 LARSQ9P2J5 1176 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TUBGCP4Q9UGJ1 667 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 KIAA1024Q9UPX6 916 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 EXOC1LA0A1B0GW35 172 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TP73O15350 636 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ASMTLO95671 621 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TNFAIP3P21580 790 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 GJC1P36383 396 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 SPARCL1Q14515 664 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 LMBRD2Q68DH5 695 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ZBTB8BQ8NAP8 495 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 NDE1Q9NXR1 346 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 HEY1Q9Y5J3 304 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TOGARAM1Q9Y4F4 1720 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 MEI4A8MW99 385 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms