RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 DDX18Q9NVP1 670 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 ARMC1Q9NVT9 282 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 BTG4Q9NY30 223 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 TRPC5Q9UL62 973 aaPredicted RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 SLC12A7Q9Y666 1083 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CENPBD1B2RD01 187 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 POLR2DO15514 142 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 TRMUO75648 421 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 SUN1O94901 812 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 NUDT17P0C025 328 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 IDEP14735 1019 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 TCP1P17987 556 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 CXCR2P25025 360 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 ERVK-9P63128 1117 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CNGA2Q16280 664 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 NAALADL2Q58DX5 795 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 RFWD3Q6PCD5 774 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 TMTC3Q6ZXV5 915 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CAGE1Q8TC20 777 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 MRGBPQ9NV56 204 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 AIPL1Q9NZN9 384 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 DNAJB4Q9UDY4 337 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 XPO7Q9UIA9 1087 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 MON2Q7Z3U7 1717 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 AP3B1O00203 1094 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CLOCKO15516 846 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 PPP6R2O75170 966 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CSPG5O95196 566 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 PSMG1O95456 288 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 POLR2CP19387 275 aaPredicted RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 ATP5DP30049 168 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 ADCY8P40145 1251 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 PRKCIP41743 596 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 SSRP1Q08945 709 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 APOFQ13790 326 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 DCAF6Q58WW2 860 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 TMEM67Q5HYA8 995 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 SLFN13Q68D06 897 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CYP2U1Q7Z449 544 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 TMC3Q7Z5M5 1100 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 ERI1Q8IV48 349 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 TRMT44Q8IYL2 757 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 TRIML2Q8N7C3 387 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 TNIP2Q8NFZ5 429 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 PLBD2Q8NHP8 589 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 PPP4R1Q8TF05 950 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 PRMT1Q99873 361 aaKnown RBP6.74□□□□□ -1.33
SIK3-212ENST00000488337 TMOD3Q9NYL9 352 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 RNF14Q9UBS8 474 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 PCDHGA3Q9Y5H0 932 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 CEPT1Q9Y6K0 416 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 DUSP10Q9Y6W6 482 aa6.74□□□□□ -1.33
SIK3-212ENST00000488337 A0A0G2JLW4 131 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 GPAA1O43292 621 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 CETN2P41208 172 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PLCD1P51178 756 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 YARSP54577 528 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 LMBRD2Q68DH5 695 aaPredicted RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 OSCP1Q8WVF1 389 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 HERVK_113Q902F9 699 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 ZNF641Q96N77 438 aaPredicted RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 AIFM3Q96NN9 605 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 SGIP1Q9BQI5 828 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 GPATCH1Q9BRR8 931 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 NUP85Q9BW27 656 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 SMARCAL1Q9NZC9 954 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 EHD2Q9NZN4 543 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 LIMA1Q9UHB6 759 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 DOLKQ9UPQ8 538 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 IVNS1ABPQ9Y6Y0 642 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PNPLA7Q6ZV29 1317 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 H0Y3Z8 333 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 NDUFA2O43678 99 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 CCNT1O60563 726 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 EPHB2P29323 1055 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 STAT3P40763 770 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 RPL5P46777 297 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 SCNN1DP51172 638 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 ZNF135P52742 658 aaPredicted RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 GJA9P57773 515 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 ATP6V0D1P61421 351 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PDE4DQ08499 809 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 CUL1Q13616 776 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 LRRC24Q50LG9 513 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 PDXDC1Q6P996 788 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 C4orf22Q6V702 233 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 FBXL16Q8N461 479 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 AADATQ8N5Z0 425 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 TLR10Q9BXR5 811 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 CALN1Q9BXU9 219 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 TTYH3Q9C0H2 523 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 NSRP1Q9H0G5 558 aaKnown RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 SMARCAD1Q9H4L7 1026 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 RNF41Q9H4P4 317 aaPredicted RBP6.73□□□□□ -1.33
SIK3-212ENST00000488337 DNAJC18Q9H819 358 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 TCP11L1Q9NUJ3 509 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 COL15A1P39059 1388 aa6.73□□□□□ -1.33
SIK3-212ENST00000488337 GOLGA8MH3BSY2 632 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms