RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ACAP3Q96P50 834 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 MYADMQ96S97 322 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 PRKD2Q9BZL6 878 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 ZHX3Q9H4I2 956 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 PLEKHA4Q9H4M7 779 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 C17orf75Q9HAS0 396 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 KCNK12Q9HB15 430 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 WDR6Q9NNW5 1121 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 POLIQ9UNA4 740 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 CLUHO75153 1309 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 CCL16O15467 120 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 NARSO43776 548 aaKnown RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 ZMYND10O75800 440 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 KRT18P05783 430 aaKnown RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 MCF2P10911 925 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 PLCG1P19174 1290 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 PROZP22891 400 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 AVPR2P30518 371 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 NTHL1P78549 312 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 CREMQ03060 361 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 CEBPZQ03701 1054 aaKnown RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 SPAG1Q07617 926 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 ELAVL2Q12926 359 aaKnown RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 UPP1Q16831 310 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 LIN9Q5TKA1 542 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 ALKAL1Q6UXT8 129 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 RSPO2Q6UXX9 243 aaPredicted RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 SPIRE2Q8WWL2 714 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 BICD1Q96G01 975 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 SNX27Q96L92 541 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 REEP2Q9BRK0 252 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 NTPCRQ9BSD7 190 aaKnown RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 TIPINQ9BVW5 301 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 BLOC1S4Q9NUP1 217 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 FBXW11Q9UKB1 542 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 CDY1Q9Y6F8 540 aa12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 PTPRZ1P23471 2315 aaPredicted RBP12.37□□□□□ -0.43
NIPAL3-207ENST00000488155 PODXLO00592 558 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 MEFVO15553 781 aaPredicted RBP12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 FAM13AO94988 1023 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 C8AP07357 584 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 FGFR3P22607 806 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 ARPP19P56211 112 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 TDGQ13569 410 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 CUL4AQ13619 759 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 SLC10A6Q3KNW5 377 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 PPM1LQ5SGD2 360 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 BRAPQ7Z569 592 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 GRASPQ7Z6J2 395 aaPredicted RBP12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 MYCT1Q8N699 235 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 STAMQ92783 540 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 AK8Q96MA6 479 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 HAPLN2Q9GZV7 340 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 MFSD1Q9H3U5 465 aa12.36□□□□□ -0.43
NIPAL3-207ENST00000488155 TMEM189-UBE2V1I3L0A0 370 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 K7ENM7 598 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 CLDN3O15551 220 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 TOM1L1O75674 476 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 CXCL8P10145 99 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 TNFSF9P41273 254 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 TCF15Q12870 199 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 XKR4Q5GH76 650 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 AXDND1Q5T1B0 1012 aaPredicted RBP12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 SLC7A14Q8TBB6 771 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 RAD54LQ92698 747 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 EPSTI1Q96J88 318 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 UROC1Q96N76 676 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 KCNH6Q9H252 994 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 ZDHHC7Q9NXF8 308 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 KCND2Q9NZV8 630 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 LARSQ9P2J5 1176 aaKnown RBP12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 MTRRQ9UBK8 725 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 TUBGCP4Q9UGJ1 667 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 KCNG1Q9UIX4 513 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 FBXL21Q9UKT6 434 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
NIPAL3-207ENST00000488155 ATG2BQ96BY7 2078 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 BMP15O95972 392 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 CFHP08603 1231 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 KCNE1P15382 129 aa12.34□□□□□ -0.43
NIPAL3-207ENST00000488155 SYT1P21579 422 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms